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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824904
Gene symbol: Foxf1
Gene name: forkhead box F1
Probe: T55054
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019516_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_019516_03
Specimen euxassay_019516_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_05
TS23: stomach Strong Regionally restricted euxassay_019516_05
Specimen euxassay_019516_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_06
TS23: vibrissa Weak Regionally restricted euxassay_019516_06
TS23: stomach Strong Regionally restricted euxassay_019516_06
Specimen euxassay_019516_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_07
TS23: vibrissa Weak Regionally restricted euxassay_019516_07
TS23: stomach Strong Regionally restricted euxassay_019516_07
Specimen euxassay_019516_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_019516_08
TS23: stomach Weak Regionally restricted euxassay_019516_08
TS23: upper jaw molar Weak Regionally restricted euxassay_019516_08
TS23: lower jaw molar Weak Regionally restricted euxassay_019516_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019516_08
Specimen euxassay_019516_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_09
TS23: stomach Strong Regionally restricted euxassay_019516_09
TS23: midgut Strong Regionally restricted euxassay_019516_09
TS23: upper jaw molar Moderate Regionally restricted euxassay_019516_09
TS23: lower jaw molar Moderate Regionally restricted euxassay_019516_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019516_09
TS23: axial skeleton tail region Strong Regionally restricted euxassay_019516_09
Specimen euxassay_019516_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_10
TS23: midgut Strong Regionally restricted euxassay_019516_10
TS23: stomach Strong Regionally restricted euxassay_019516_10
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019516_10
TS23: axial skeleton tail region Strong Regionally restricted euxassay_019516_10
Specimen euxassay_019516_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_11
TS23: midgut Strong Regionally restricted euxassay_019516_11
TS23: upper jaw incisor Weak Regionally restricted euxassay_019516_11
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019516_11
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_019516_11
Specimen euxassay_019516_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019516_12
TS23: midgut Strong Regionally restricted euxassay_019516_12
TS23: lower jaw incisor Moderate Regionally restricted euxassay_019516_12
TS23: upper jaw incisor Moderate Regionally restricted euxassay_019516_12
TS23: axial skeleton tail region Weak Regionally restricted euxassay_019516_12
Specimen euxassay_019516_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_13
TS23: midgut Strong Regionally restricted euxassay_019516_13
TS23: upper jaw incisor Moderate Regionally restricted euxassay_019516_13
TS23: lower jaw incisor Moderate Regionally restricted euxassay_019516_13
TS23: axial skeleton tail region Weak Regionally restricted euxassay_019516_13
TS23: bladder Moderate Regionally restricted euxassay_019516_13
TS23: urethra Moderate Regionally restricted euxassay_019516_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
Specimen euxassay_019516_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_14
TS23: hindgut Strong Regionally restricted euxassay_019516_14
TS23: midgut Strong Regionally restricted euxassay_019516_14
TS23: upper jaw incisor Weak Regionally restricted euxassay_019516_14
TS23: lower jaw incisor Weak Regionally restricted euxassay_019516_14
TS23: axial skeleton tail region Weak Regionally restricted euxassay_019516_14
TS23: bladder Moderate Regionally restricted euxassay_019516_14
TS23: urethra Moderate Regionally restricted euxassay_019516_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
Specimen euxassay_019516_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_15
TS23: midgut Strong Regionally restricted euxassay_019516_15
TS23: hindgut Strong Regionally restricted euxassay_019516_15
TS23: axial skeleton tail region Weak Regionally restricted euxassay_019516_15
TS23: bladder Moderate Regionally restricted euxassay_019516_15
TS23: urethra Moderate Regionally restricted euxassay_019516_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: esophagus Moderate Regionally restricted euxassay_019516_15
Specimen euxassay_019516_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_16
TS23: midgut Strong Regionally restricted euxassay_019516_16
TS23: hindgut Strong Regionally restricted euxassay_019516_16
TS23: upper jaw incisor Weak Regionally restricted euxassay_019516_16
TS23: lower jaw incisor Weak Regionally restricted euxassay_019516_16
TS23: bladder Moderate Regionally restricted euxassay_019516_16
TS23: urethra Moderate Regionally restricted euxassay_019516_16 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: esophagus Moderate Regionally restricted euxassay_019516_16
Specimen euxassay_019516_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_17
TS23: midgut Strong Regionally restricted euxassay_019516_17
TS23: hindgut Strong Regionally restricted euxassay_019516_17
TS23: upper jaw incisor Weak Regionally restricted euxassay_019516_17
TS23: lower jaw incisor Weak Regionally restricted euxassay_019516_17
TS23: bladder Moderate Regionally restricted euxassay_019516_17
TS23: esophagus Weak Regionally restricted euxassay_019516_17
Specimen euxassay_019516_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_18
TS23: midgut Strong Regionally restricted euxassay_019516_18
TS23: upper jaw incisor Weak Regionally restricted euxassay_019516_18
TS23: lower jaw incisor Weak Regionally restricted euxassay_019516_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019516_18
Specimen euxassay_019516_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_19
TS23: midgut Strong Regionally restricted euxassay_019516_19
TS23: upper jaw molar Weak Regionally restricted euxassay_019516_19
TS23: lower jaw molar Weak Regionally restricted euxassay_019516_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019516_19
Specimen euxassay_019516_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019516_20
TS23: midgut Moderate Regionally restricted euxassay_019516_20
TS23: upper jaw molar Weak Regionally restricted euxassay_019516_20
TS23: lower jaw molar Weak Regionally restricted euxassay_019516_20
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019516_20
Specimen euxassay_019516_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_21
TS23: vibrissa Weak Regionally restricted euxassay_019516_21
TS23: upper jaw molar Moderate Regionally restricted euxassay_019516_21
TS23: lower jaw molar Moderate Regionally restricted euxassay_019516_21
TS23: submandibular gland primordium Strong Regionally restricted euxassay_019516_21
Specimen euxassay_019516_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_22
TS23: vibrissa Weak Regionally restricted euxassay_019516_22
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019516_22
Specimen euxassay_019516_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Regionally restricted euxassay_019516_23
TS23: vibrissa Weak Regionally restricted euxassay_019516_23
Specimen euxassay_019516_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Moderate Regionally restricted euxassay_019516_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory