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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824871
Gene symbol: Fkbp1a
Gene name: FK506 binding protein 1a
Probe: MGC clone 6253
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003477_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003477_01
Specimen euxassay_003477_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003477_02
Specimen euxassay_003477_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003477_03
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_003477_03
Specimen euxassay_003477_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003477_04
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003477_04
Specimen euxassay_003477_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003477_05
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003477_05
Specimen euxassay_003477_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003477_06
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003477_06
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_003477_06
TS23: upper lip Moderate Regionally restricted euxassay_003477_06
Specimen euxassay_003477_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_003477_07
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_003477_07
TS23: upper jaw molar Moderate Regionally restricted euxassay_003477_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_003477_07
TS23: upper lip Moderate Regionally restricted euxassay_003477_07
TS23: lower lip Moderate Regionally restricted euxassay_003477_07
Specimen euxassay_003477_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_003477_08
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003477_08
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_003477_08
TS23: lower jaw molar Moderate Regionally restricted euxassay_003477_08
TS23: upper jaw molar Moderate Regionally restricted euxassay_003477_08
TS23: upper lip Moderate Regionally restricted euxassay_003477_08
TS23: lower lip Moderate Regionally restricted euxassay_003477_08
Specimen euxassay_003477_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_003477_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003477_09
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003477_09
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_003477_09
TS23: lower jaw molar Moderate Regionally restricted euxassay_003477_09
TS23: upper jaw molar Moderate Regionally restricted euxassay_003477_09
TS23: lower lip Moderate Regionally restricted euxassay_003477_09
TS23: upper lip Moderate Regionally restricted euxassay_003477_09
Specimen euxassay_003477_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_003477_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003477_10
TS23: upper jaw molar Moderate Regionally restricted euxassay_003477_10
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_003477_10
TS23: lower jaw molar Moderate Regionally restricted euxassay_003477_10
TS23: lower lip Moderate Regionally restricted euxassay_003477_10
TS23: upper lip Moderate Regionally restricted euxassay_003477_10
Specimen euxassay_003477_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_003477_11
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_003477_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003477_11
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003477_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_003477_11
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003477_11
Specimen euxassay_003477_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_003477_12
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_003477_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_003477_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003477_12
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003477_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_003477_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_003477_12
TS23: Meckel's cartilage Weak Regionally restricted euxassay_003477_12
Specimen euxassay_003477_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_003477_13
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_003477_13
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_003477_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003477_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_003477_13
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003477_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_003477_13
TS23: ventral grey horn Weak Regionally restricted euxassay_003477_13
Specimen euxassay_003477_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus ventricular layer Moderate Regionally restricted euxassay_003477_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_003477_14
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_003477_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003477_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_003477_14
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_003477_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_003477_14
Specimen euxassay_003477_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_003477_15
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_003477_15
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_003477_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_003477_15
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_003477_15
TS23: pons ventricular layer Weak Regionally restricted euxassay_003477_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_003477_15
Specimen euxassay_003477_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_003477_16
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_003477_16
TS23: pons ventricular layer Weak Regionally restricted euxassay_003477_16
TS23: ventral grey horn Moderate Regionally restricted euxassay_003477_16
Specimen euxassay_003477_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_003477_17
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_003477_17
TS23: pons ventricular layer Moderate Regionally restricted euxassay_003477_17
TS23: ventral grey horn Moderate Regionally restricted euxassay_003477_17
Specimen euxassay_003477_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_003477_18
TS23: pons ventricular layer Moderate Regionally restricted euxassay_003477_18
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003477_18
Specimen euxassay_003477_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_003477_19
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003477_19
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_003477_19
TS23: lower jaw incisor Moderate Regionally restricted euxassay_003477_19
TS23: upper jaw molar Moderate Regionally restricted euxassay_003477_19
Specimen euxassay_003477_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003477_20
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003477_20
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_003477_20
TS23: lower jaw molar Moderate Regionally restricted euxassay_003477_20
TS23: upper jaw molar Moderate Regionally restricted euxassay_003477_20
Specimen euxassay_003477_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003477_21
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003477_21
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_003477_21
TS23: upper jaw molar Moderate Regionally restricted euxassay_003477_21
TS23: lower jaw molar Moderate Regionally restricted euxassay_003477_21
Specimen euxassay_003477_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_003477_22
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003477_22
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_003477_22
TS23: lower jaw molar Moderate Regionally restricted euxassay_003477_22
TS23: upper jaw molar Moderate Regionally restricted euxassay_003477_22
TS23: lower lip Moderate Regionally restricted euxassay_003477_22
TS23: upper lip Moderate Regionally restricted euxassay_003477_22
Specimen euxassay_003477_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003477_23
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_003477_23
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_003477_23
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_003477_23
TS23: upper jaw molar Moderate Regionally restricted euxassay_003477_23
TS23: lower jaw molar Moderate Regionally restricted euxassay_003477_23
TS23: upper lip Moderate Regionally restricted euxassay_003477_23
TS23: lower lip Moderate Regionally restricted euxassay_003477_23
Specimen euxassay_003477_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_003477_24
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_003477_24
TS23: upper lip Moderate Regionally restricted euxassay_003477_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory