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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824249
Gene symbol: Dclk1
Gene name: doublecortin-like kinase 1
Probe: T31388
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012542_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012542_05
Specimen euxassay_012542_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Moderate Regionally restricted euxassay_012542_06
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012542_06
Specimen euxassay_012542_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012542_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_012542_07
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012542_07
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012542_07
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012542_07
Specimen euxassay_012542_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012542_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012542_08
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012542_08
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012542_08
Specimen euxassay_012542_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012542_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012542_09
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012542_09
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012542_09
TS23: ventral grey horn Moderate Regionally restricted euxassay_012542_09
Specimen euxassay_012542_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012542_10
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012542_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012542_10
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012542_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_012542_10
Specimen euxassay_012542_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012542_11
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012542_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012542_11
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_012542_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012542_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_012542_11
Specimen euxassay_012542_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata floor plate Moderate Regionally restricted euxassay_012542_12
TS23: metencephalon floor plate Moderate Regionally restricted euxassay_012542_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012542_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_012542_12
Specimen euxassay_012542_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012542_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012542_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012542_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012542_13
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_012542_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012542_13
TS23: ventral grey horn Moderate Regionally restricted euxassay_012542_13
Specimen euxassay_012542_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012542_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012542_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012542_14
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_012542_14
Specimen euxassay_012542_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012542_15
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012542_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012542_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012542_15
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012542_15
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_012542_15
Specimen euxassay_012542_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012542_16
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_012542_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_012542_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012542_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012542_16
Specimen euxassay_012542_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012542_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_012542_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012542_17
Specimen euxassay_012542_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012542_18
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory