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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823991
Gene symbol: Col4a1
Gene name: collagen, type IV, alpha 1
Probe: MGC clone 91373
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_017239_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_01
Specimen euxassay_017239_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_02
Specimen euxassay_017239_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_03
Specimen euxassay_017239_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_04
Specimen euxassay_017239_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_05
Specimen euxassay_017239_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_06
TS23: testis Strong Regionally restricted euxassay_017239_06
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_06
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_06
Specimen euxassay_017239_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_07
TS23: testis Strong Regionally restricted euxassay_017239_07
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_07
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_07
Specimen euxassay_017239_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_08
TS23: testis Strong Regionally restricted euxassay_017239_08
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_08
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_08
Specimen euxassay_017239_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_09
TS23: testis Strong Regionally restricted euxassay_017239_09
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_09
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_09
Specimen euxassay_017239_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_10
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_10
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_10
Specimen euxassay_017239_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_11
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_11
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_11
Specimen euxassay_017239_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_12
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_12
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_12
Specimen euxassay_017239_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_13
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_13
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_13
Specimen euxassay_017239_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_14
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_14
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_14
Specimen euxassay_017239_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_15
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_15
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_15
Specimen euxassay_017239_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_16
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_16
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_16
Specimen euxassay_017239_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_17
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_17
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_17
Specimen euxassay_017239_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_18
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_18
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_017239_18
Specimen euxassay_017239_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_19
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_19
Specimen euxassay_017239_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_20
TS23: testis Strong Regionally restricted euxassay_017239_20
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_017239_20
Specimen euxassay_017239_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_21
TS23: testis Strong Regionally restricted euxassay_017239_21
Specimen euxassay_017239_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_22
TS23: testis Strong Regionally restricted euxassay_017239_22
Specimen euxassay_017239_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Strong Regionally restricted euxassay_017239_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory