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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823931
Gene symbol: Clmn
Gene name: calmin
Probe: IMAGE clone 3155880
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_002782_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_002782_01
Specimen euxassay_002782_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_002782_02
Specimen euxassay_002782_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_002782_03
Specimen euxassay_002782_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Moderate Regionally restricted euxassay_002782_04
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_002782_04
TS23: limb Moderate Regionally restricted euxassay_002782_04
Specimen euxassay_002782_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_05
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_05
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_002782_05
TS23: limb Moderate Regionally restricted euxassay_002782_05
Specimen euxassay_002782_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_002782_06
TS23: midgut Moderate Regionally restricted euxassay_002782_06
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_06
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_06
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_002782_06
TS23: limb Moderate Regionally restricted euxassay_002782_06
Specimen euxassay_002782_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_002782_07
TS23: midgut Moderate Regionally restricted euxassay_002782_07
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_07
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_07
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_002782_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002782_07
TS23: limb Moderate Regionally restricted euxassay_002782_07
Specimen euxassay_002782_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_002782_08
TS23: stomach Moderate Regionally restricted euxassay_002782_08
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_08
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_08
TS23: olfactory epithelium Strong Regionally restricted euxassay_002782_08
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_002782_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002782_08
Specimen euxassay_002782_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: stomach Moderate Regionally restricted euxassay_002782_09
TS23: midgut Moderate Regionally restricted euxassay_002782_09
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_09
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_09
TS23: renal calyx Strong Regionally restricted euxassay_002782_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_002782_09
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_002782_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002782_09
Specimen euxassay_002782_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_002782_10
TS23: stomach Moderate Regionally restricted euxassay_002782_10
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_10
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_10
TS23: renal pelvis Strong Regionally restricted euxassay_002782_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_002782_10
TS23: pancreas Strong Regionally restricted euxassay_002782_10
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_002782_10
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002782_10
Specimen euxassay_002782_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_002782_11
TS23: stomach Moderate Regionally restricted euxassay_002782_11
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_11
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_11
TS23: renal calyx Strong Regionally restricted euxassay_002782_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_002782_11
TS23: pancreas Strong Regionally restricted euxassay_002782_11
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_002782_11
Specimen euxassay_002782_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_002782_12
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_002782_12
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_12
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_002782_12
TS23: pancreas Strong Regionally restricted euxassay_002782_12
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_002782_12
Specimen euxassay_002782_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_002782_13
TS23: hindgut Moderate Regionally restricted euxassay_002782_13
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_002782_13
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_13
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_13
TS23: naris Strong Regionally restricted euxassay_002782_13
TS23: pancreas Strong Regionally restricted euxassay_002782_13
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_002782_13
Specimen euxassay_002782_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindgut Moderate Regionally restricted euxassay_002782_14
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_002782_14
TS23: midgut Moderate Regionally restricted euxassay_002782_14
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_14
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_14
TS23: naris Strong Regionally restricted euxassay_002782_14
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_002782_14
TS23: bladder Moderate Regionally restricted euxassay_002782_14
Specimen euxassay_002782_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rectum Moderate Regionally restricted euxassay_002782_15
TS23: hindgut Moderate Regionally restricted euxassay_002782_15
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_002782_15
TS23: midgut Moderate Regionally restricted euxassay_002782_15
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_15
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_002782_15
TS23: naris Strong Regionally restricted euxassay_002782_15
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_002782_15
TS23: bladder Moderate Regionally restricted euxassay_002782_15
Specimen euxassay_002782_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindgut Moderate Regionally restricted euxassay_002782_16
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_002782_16
TS23: midgut Moderate Regionally restricted euxassay_002782_16
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_16
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_002782_16
TS23: naris Strong Regionally restricted euxassay_002782_16
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_002782_16
Specimen euxassay_002782_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_002782_17
TS23: hindgut Moderate Regionally restricted euxassay_002782_17
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_002782_17
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_17
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_002782_17
TS23: naris Strong Regionally restricted euxassay_002782_17
TS23: pancreas Strong Regionally restricted euxassay_002782_17
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_002782_17
Specimen euxassay_002782_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_002782_18
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_18
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_002782_18
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_002782_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002782_18
Specimen euxassay_002782_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_002782_19
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_19
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_002782_19
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_002782_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_002782_19
Specimen euxassay_002782_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midgut Moderate Regionally restricted euxassay_002782_20
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_20
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_002782_20
TS23: renal pelvis Strong Regionally restricted euxassay_002782_20
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_002782_20
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002782_20
Specimen euxassay_002782_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_21
TS23: renal calyx Strong Regionally restricted euxassay_002782_21
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_002782_21
Specimen euxassay_002782_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_002782_22
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_002782_22
TS23: limb Moderate Regionally restricted euxassay_002782_22
Specimen euxassay_002782_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: limb Moderate Regionally restricted euxassay_002782_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory