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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823913
Gene symbol: Cldn4
Gene name: claudin 4
Probe: T36163
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011852_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011852_01
TS23: epidermis Weak Regionally restricted euxassay_011852_01
TS23: stomach Strong Regionally restricted euxassay_011852_01
TS23: cornea epithelium Weak Regionally restricted euxassay_011852_01
TS23: outer ear Moderate Regionally restricted euxassay_011852_01
Specimen euxassay_011852_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011852_02
TS23: epidermis Weak Regionally restricted euxassay_011852_02
TS23: stomach Strong Regionally restricted euxassay_011852_02
TS23: cornea epithelium Weak Regionally restricted euxassay_011852_02
TS23: lung Moderate Regionally restricted euxassay_011852_02
TS23: outer ear Moderate Regionally restricted euxassay_011852_02
Specimen euxassay_011852_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011852_03
TS23: epidermis Weak Regionally restricted euxassay_011852_03
TS23: stomach Strong Regionally restricted euxassay_011852_03
TS23: cornea epithelium Weak Regionally restricted euxassay_011852_03
TS23: lung Moderate Regionally restricted euxassay_011852_03
TS23: outer ear Moderate Regionally restricted euxassay_011852_03
Specimen euxassay_011852_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011852_04
TS23: epidermis Weak Regionally restricted euxassay_011852_04
TS23: stomach Moderate Regionally restricted euxassay_011852_04
TS23: cornea epithelium Weak Regionally restricted euxassay_011852_04
TS23: lung Moderate Regionally restricted euxassay_011852_04
TS23: inner ear Moderate Regionally restricted euxassay_011852_04
Specimen euxassay_011852_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011852_05
TS23: epidermis Weak Regionally restricted euxassay_011852_05
TS23: stomach Weak Regionally restricted euxassay_011852_05
TS23: lung Moderate Regionally restricted euxassay_011852_05
TS23: metanephros Moderate Regionally restricted euxassay_011852_05
Specimen euxassay_011852_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011852_06
TS23: epidermis Weak Regionally restricted euxassay_011852_06
TS23: stomach Weak Regionally restricted euxassay_011852_06
TS23: lung Weak Regionally restricted euxassay_011852_06
TS23: metanephros Moderate Regionally restricted euxassay_011852_06
TS23: pancreas Weak Regionally restricted euxassay_011852_06
Specimen euxassay_011852_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Weak Regionally restricted euxassay_011852_07
TS23: stomach Weak Regionally restricted euxassay_011852_07
TS23: midgut Weak Regionally restricted euxassay_011852_07
TS23: lung Weak Regionally restricted euxassay_011852_07
TS23: metanephros Moderate Regionally restricted euxassay_011852_07
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011852_07
TS23: sublingual gland primordium Strong Regionally restricted euxassay_011852_07
TS23: pancreas Weak Regionally restricted euxassay_011852_07
Specimen euxassay_011852_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Weak Regionally restricted euxassay_011852_08
TS23: midgut Moderate Regionally restricted euxassay_011852_08
TS23: lung Weak Regionally restricted euxassay_011852_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_011852_08
TS23: esophagus Weak Regionally restricted euxassay_011852_08
TS23: pituitary gland Weak Regionally restricted euxassay_011852_08
Specimen euxassay_011852_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Weak Regionally restricted euxassay_011852_09
TS23: midgut Moderate Regionally restricted euxassay_011852_09
TS23: rectum Moderate Regionally restricted euxassay_011852_09
TS23: hindgut Moderate Regionally restricted euxassay_011852_09
TS23: lung Weak Regionally restricted euxassay_011852_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_011852_09
TS23: urethra Strong Regionally restricted euxassay_011852_09 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: nephric duct of male Weak Regionally restricted euxassay_011852_09
TS23: bladder fundus Strong Regionally restricted euxassay_011852_09
TS23: larynx Weak Regionally restricted euxassay_011852_09
TS23: esophagus Weak Regionally restricted euxassay_011852_09
TS23: pituitary gland Weak Regionally restricted euxassay_011852_09
Specimen euxassay_011852_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Weak Regionally restricted euxassay_011852_10
TS23: midgut Weak Regionally restricted euxassay_011852_10
TS23: rectum Moderate Regionally restricted euxassay_011852_10
TS23: hindgut Moderate Regionally restricted euxassay_011852_10
TS23: lung Weak Regionally restricted euxassay_011852_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_011852_10
TS23: naris Weak Regionally restricted euxassay_011852_10
TS23: urethra Strong Regionally restricted euxassay_011852_10 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: nephric duct of male Moderate Regionally restricted euxassay_011852_10
TS23: bladder fundus Strong Regionally restricted euxassay_011852_10
TS23: larynx Weak Regionally restricted euxassay_011852_10
TS23: esophagus Weak Regionally restricted euxassay_011852_10
TS23: pituitary gland Weak Regionally restricted euxassay_011852_10
Specimen euxassay_011852_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_011852_11
TS23: midgut Weak Regionally restricted euxassay_011852_11
TS23: lung Weak Regionally restricted euxassay_011852_11
Specimen euxassay_011852_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_011852_12
TS23: midgut Moderate Regionally restricted euxassay_011852_12
TS23: lung Weak Regionally restricted euxassay_011852_12
TS23: metanephros Moderate Regionally restricted euxassay_011852_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011852_12
TS23: naris Moderate Regionally restricted euxassay_011852_12
TS23: sublingual gland primordium Moderate Regionally restricted euxassay_011852_12
Specimen euxassay_011852_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_011852_13
TS23: midgut Moderate Regionally restricted euxassay_011852_13
TS23: lung Weak Regionally restricted euxassay_011852_13
TS23: metanephros Moderate Regionally restricted euxassay_011852_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011852_13
TS23: sublingual gland primordium Moderate Regionally restricted euxassay_011852_13
Specimen euxassay_011852_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_011852_14
TS23: lung Weak Regionally restricted euxassay_011852_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011852_14
Specimen euxassay_011852_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011852_15
TS23: epidermis Moderate Regionally restricted euxassay_011852_15
TS23: lung Weak Regionally restricted euxassay_011852_15
TS23: inner ear Moderate Regionally restricted euxassay_011852_15
Specimen euxassay_011852_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011852_16
TS23: epidermis Moderate Regionally restricted euxassay_011852_16
TS23: lung Weak Regionally restricted euxassay_011852_16
TS23: outer ear Moderate Regionally restricted euxassay_011852_16
TS23: inner ear Moderate Regionally restricted euxassay_011852_16
Specimen euxassay_011852_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011852_17
TS23: epidermis Moderate Regionally restricted euxassay_011852_17
TS23: lung Weak Regionally restricted euxassay_011852_17
TS23: outer ear Moderate Regionally restricted euxassay_011852_17
Specimen euxassay_011852_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011852_18
TS23: epidermis Moderate Regionally restricted euxassay_011852_18
TS23: cornea epithelium Weak Regionally restricted euxassay_011852_18
TS23: outer ear Strong Regionally restricted euxassay_011852_18
Specimen euxassay_011852_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011852_19
TS23: epidermis Moderate Regionally restricted euxassay_011852_19
TS23: cornea epithelium Weak Regionally restricted euxassay_011852_19
TS23: outer ear Strong Regionally restricted euxassay_011852_19
Specimen euxassay_011852_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_011852_20
TS23: epidermis Moderate Regionally restricted euxassay_011852_20
TS23: cornea epithelium Weak Regionally restricted euxassay_011852_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory