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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823764
Gene symbol: Cdh13
Gene name: cadherin 13
Probe: T30068
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011981_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hand Moderate Regionally restricted euxassay_011981_01
TS23: fibula Moderate Regionally restricted euxassay_011981_01
TS23: tibia Moderate Regionally restricted euxassay_011981_01
Specimen euxassay_011981_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_02
TS23: fibula Moderate Regionally restricted euxassay_011981_02
TS23: tibia Moderate Regionally restricted euxassay_011981_02
TS23: femur Moderate Regionally restricted euxassay_011981_02
Specimen euxassay_011981_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_03
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_03
TS23: fibula Moderate Regionally restricted euxassay_011981_03
TS23: tibia Moderate Regionally restricted euxassay_011981_03
TS23: femur Moderate Regionally restricted euxassay_011981_03
Specimen euxassay_011981_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_04
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_04
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_04
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_04
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011981_04
TS23: femur Moderate Regionally restricted euxassay_011981_04
Specimen euxassay_011981_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_05
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_05
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_05
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_05
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_05
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011981_05
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011981_05
TS23: femur Moderate Regionally restricted euxassay_011981_05
Specimen euxassay_011981_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_06
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_06
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_06
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_06
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_06
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_06
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_011981_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011981_06
TS23: vagus ganglion Moderate Regionally restricted euxassay_011981_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011981_06
TS23: upper lip Strong Regionally restricted euxassay_011981_06
Specimen euxassay_011981_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_07
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011981_07
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_07
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_07
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_07
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_07
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_011981_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011981_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011981_07
TS23: upper lip Strong Regionally restricted euxassay_011981_07
TS23: lower lip Strong Regionally restricted euxassay_011981_07
Specimen euxassay_011981_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011981_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_08
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_08
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_08
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_08
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_011981_08
TS23: lower lip Strong Regionally restricted euxassay_011981_08
TS23: upper lip Strong Regionally restricted euxassay_011981_08
Specimen euxassay_011981_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011981_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_09
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_09
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_09
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_09
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_011981_09
TS23: lower lip Moderate Regionally restricted euxassay_011981_09
TS23: upper lip Moderate Regionally restricted euxassay_011981_09
Specimen euxassay_011981_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011981_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_10
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_10
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_10
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_10
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_011981_10
Specimen euxassay_011981_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011981_11
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_11
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_11
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_11
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_11
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_11
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_011981_11
TS23: Meckel's cartilage Strong Regionally restricted euxassay_011981_11
Specimen euxassay_011981_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011981_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_12
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_12
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_12
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_12
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_011981_12
Specimen euxassay_011981_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011981_13
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_011981_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_13
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_13
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_13
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_13
TS23: spinal cord mantle layer Strong Regionally restricted euxassay_011981_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011981_13
Specimen euxassay_011981_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011981_14
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_14
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_14
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_14
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_14
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_011981_14
TS23: upper lip Strong Regionally restricted euxassay_011981_14
TS23: lower lip Strong Regionally restricted euxassay_011981_14
Specimen euxassay_011981_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011981_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_15
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_15
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_15
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_15
TS23: upper lip Strong Regionally restricted euxassay_011981_15
Specimen euxassay_011981_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011981_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_16
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_16
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_16
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_16
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_16
TS23: upper lip Strong Regionally restricted euxassay_011981_16
TS23: Meckel's cartilage Strong Regionally restricted euxassay_011981_16
Specimen euxassay_011981_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011981_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_17
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_17
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_17
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_17
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_17
TS23: pons mantle layer Strong Regionally restricted euxassay_011981_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011981_17
TS23: upper lip Strong Regionally restricted euxassay_011981_17
TS23: femur Moderate Regionally restricted euxassay_011981_17
TS23: Meckel's cartilage Strong Regionally restricted euxassay_011981_17
Specimen euxassay_011981_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_011981_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_18
TS23: midbrain mantle layer Strong Regionally restricted euxassay_011981_18
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_18
TS23: pons marginal layer Strong Regionally restricted euxassay_011981_18
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011981_18
TS23: medulla oblongata alar plate mantle layer Strong Regionally restricted euxassay_011981_18
TS23: upper lip Strong Regionally restricted euxassay_011981_18
TS23: femur Moderate Regionally restricted euxassay_011981_18
Specimen euxassay_011981_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_19
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_011981_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_011981_19
TS23: lower lip Strong Regionally restricted euxassay_011981_19
TS23: upper lip Strong Regionally restricted euxassay_011981_19
TS23: humerus Strong Regionally restricted euxassay_011981_19
TS23: scapula Strong Regionally restricted euxassay_011981_19
TS23: femur Strong Regionally restricted euxassay_011981_19
Specimen euxassay_011981_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_20
TS23: lower lip Strong Regionally restricted euxassay_011981_20
TS23: upper lip Strong Regionally restricted euxassay_011981_20
TS23: humerus Strong Regionally restricted euxassay_011981_20
TS23: femur Strong Regionally restricted euxassay_011981_20
TS23: Meckel's cartilage Strong Regionally restricted euxassay_011981_20
Specimen euxassay_011981_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_21
TS23: humerus Strong Regionally restricted euxassay_011981_21
TS23: femur Strong Regionally restricted euxassay_011981_21
TS23: Meckel's cartilage Strong Regionally restricted euxassay_011981_21
Specimen euxassay_011981_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_22
TS23: humerus Strong Regionally restricted euxassay_011981_22
TS23: femur Strong Regionally restricted euxassay_011981_22
Specimen euxassay_011981_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_011981_23
TS23: humerus Strong Regionally restricted euxassay_011981_23
TS23: femur Strong Regionally restricted euxassay_011981_23
TS23: fibula Strong Regionally restricted euxassay_011981_23
TS23: tibia Strong Regionally restricted euxassay_011981_23
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_011981_23
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_011981_23
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_011981_23
TS23: tarsus Strong Regionally restricted euxassay_011981_23
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory