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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823658
Gene symbol: Cbx1
Gene name: chromobox 1
Probe: T30402
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012256_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_012256_01
TS23: neural retina Weak Regionally restricted euxassay_012256_01
TS23: cranial muscle Weak Regionally restricted euxassay_012256_01
Specimen euxassay_012256_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_012256_02
TS23: orbito-sphenoid Weak Regionally restricted euxassay_012256_02
TS23: cranial muscle Weak Regionally restricted euxassay_012256_02
Specimen euxassay_012256_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_012256_03
TS23: orbito-sphenoid Weak Regionally restricted euxassay_012256_03
TS23: temporal bone petrous part Weak Regionally restricted euxassay_012256_03
TS23: vibrissa Weak Regionally restricted euxassay_012256_03
TS23: cranial muscle Weak Regionally restricted euxassay_012256_03
Specimen euxassay_012256_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_012256_04
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_012256_04
TS23: temporal bone petrous part Weak Regionally restricted euxassay_012256_04
TS23: vibrissa Weak Regionally restricted euxassay_012256_04
TS23: cranial muscle Weak Regionally restricted euxassay_012256_04
Specimen euxassay_012256_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_012256_05
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_012256_05
TS23: upper jaw molar Weak Regionally restricted euxassay_012256_05
TS23: lower jaw molar Weak Regionally restricted euxassay_012256_05
TS23: temporal bone petrous part Weak Regionally restricted euxassay_012256_05
TS23: lung Weak Regionally restricted euxassay_012256_05
TS23: olfactory epithelium Weak Regionally restricted euxassay_012256_05
Specimen euxassay_012256_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_012256_06
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_012256_06
TS23: lung Weak Regionally restricted euxassay_012256_06
TS23: olfactory epithelium Weak Regionally restricted euxassay_012256_06
Specimen euxassay_012256_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_012256_07
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_012256_07
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_012256_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_012256_07
TS23: lung Weak Regionally restricted euxassay_012256_07
TS23: olfactory epithelium Weak Regionally restricted euxassay_012256_07
Specimen euxassay_012256_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_012256_08
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_012256_08
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_012256_08
TS23: renal cortex Strong Regionally restricted euxassay_012256_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_012256_08
TS23: upper jaw incisor Weak Regionally restricted euxassay_012256_08
TS23: lower jaw incisor Weak Regionally restricted euxassay_012256_08
TS23: lung Weak Regionally restricted euxassay_012256_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_012256_08
Specimen euxassay_012256_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Uniform euxassay_012256_09
TS23: hypothalamus ventricular layer Strong Uniform euxassay_012256_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012256_09
TS23: renal cortex Moderate Regionally restricted euxassay_012256_09
TS23: lung Weak Regionally restricted euxassay_012256_09
TS23: pituitary gland Weak Regionally restricted euxassay_012256_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_012256_09
Specimen euxassay_012256_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_012256_10
TS23: diencephalon lateral wall ventricular layer Strong Uniform euxassay_012256_10
TS23: hypothalamus ventricular layer Strong Uniform euxassay_012256_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_012256_10
TS23: thymus primordium Weak Regionally restricted euxassay_012256_10
TS23: upper jaw incisor Weak Regionally restricted euxassay_012256_10
TS23: lung Weak Regionally restricted euxassay_012256_10
TS23: pituitary gland Moderate Regionally restricted euxassay_012256_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_012256_10
Specimen euxassay_012256_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_012256_11
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_012256_11
TS23: hypothalamus ventricular layer Moderate Uniform euxassay_012256_11
TS23: diencephalon lateral wall marginal layer Moderate Uniform euxassay_012256_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_012256_11
TS23: thymus primordium Weak Regionally restricted euxassay_012256_11
TS23: upper jaw incisor Weak Regionally restricted euxassay_012256_11
TS23: lower jaw incisor Weak Regionally restricted euxassay_012256_11
TS23: lung Weak Regionally restricted euxassay_012256_11
TS23: pituitary gland Weak Regionally restricted euxassay_012256_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_012256_11
Specimen euxassay_012256_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus ventricular layer Weak Uniform euxassay_012256_12
TS23: diencephalon lateral wall ventricular layer Weak Uniform euxassay_012256_12
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_012256_12
TS23: telencephalon ventricular layer Weak Uniform euxassay_012256_12
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012256_12
TS23: thymus primordium Weak Regionally restricted euxassay_012256_12
TS23: lower jaw incisor Weak Regionally restricted euxassay_012256_12
TS23: upper jaw incisor Weak Regionally restricted euxassay_012256_12
TS23: lung Weak Regionally restricted euxassay_012256_12
TS23: pituitary gland Weak Regionally restricted euxassay_012256_12
Specimen euxassay_012256_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_012256_13
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012256_13
TS23: thymus primordium Weak Regionally restricted euxassay_012256_13
TS23: lung Weak Regionally restricted euxassay_012256_13
TS23: pituitary gland Weak Regionally restricted euxassay_012256_13
TS23: olfactory epithelium Weak Regionally restricted euxassay_012256_13
Specimen euxassay_012256_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_012256_14
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_012256_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_012256_14
TS23: thymus primordium Moderate Regionally restricted euxassay_012256_14
TS23: lung Weak Regionally restricted euxassay_012256_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_012256_14
Specimen euxassay_012256_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_012256_15
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_012256_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_012256_15
TS23: renal cortex Moderate Regionally restricted euxassay_012256_15
TS23: submandibular gland primordium Strong Regionally restricted euxassay_012256_15
TS23: lung Weak Regionally restricted euxassay_012256_15
TS23: vibrissa Weak Regionally restricted euxassay_012256_15
Specimen euxassay_012256_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_012256_16
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_012256_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012256_16
TS23: renal cortex Strong Regionally restricted euxassay_012256_16
TS23: submandibular gland primordium Strong Regionally restricted euxassay_012256_16
TS23: upper jaw molar Moderate Regionally restricted euxassay_012256_16
TS23: lower jaw molar Moderate Regionally restricted euxassay_012256_16
TS23: lung Weak Regionally restricted euxassay_012256_16
TS23: vibrissa Weak Regionally restricted euxassay_012256_16
Specimen euxassay_012256_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_012256_17
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_012256_17
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012256_17
TS23: renal cortex Strong Regionally restricted euxassay_012256_17
TS23: submandibular gland primordium Strong Regionally restricted euxassay_012256_17
TS23: orbito-sphenoid Weak Regionally restricted euxassay_012256_17
TS23: lung Weak Regionally restricted euxassay_012256_17
TS23: vibrissa Weak Regionally restricted euxassay_012256_17
Specimen euxassay_012256_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_012256_18
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_012256_18
TS23: renal cortex Strong Regionally restricted euxassay_012256_18
TS23: orbito-sphenoid Weak Regionally restricted euxassay_012256_18
TS23: lung Weak Regionally restricted euxassay_012256_18
TS23: cranial muscle Weak Regionally restricted euxassay_012256_18
Specimen euxassay_012256_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_012256_19
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_012256_19
TS23: neural retina Weak Regionally restricted euxassay_012256_19
TS23: orbito-sphenoid Weak Regionally restricted euxassay_012256_19
TS23: lung Weak Regionally restricted euxassay_012256_19
TS23: cranial muscle Weak Regionally restricted euxassay_012256_19
Specimen euxassay_012256_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_012256_20
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_012256_20
TS23: neural retina Weak Regionally restricted euxassay_012256_20
TS23: orbito-sphenoid Weak Regionally restricted euxassay_012256_20
TS23: temporal bone petrous part Weak Regionally restricted euxassay_012256_20
TS23: lung Weak Regionally restricted euxassay_012256_20
TS23: cranial muscle Weak Regionally restricted euxassay_012256_20
Specimen euxassay_012256_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_012256_21
TS23: neural retina Weak Regionally restricted euxassay_012256_21
TS23: temporal bone petrous part Weak Regionally restricted euxassay_012256_21
TS23: lung Weak Regionally restricted euxassay_012256_21
TS23: cranial muscle Weak Regionally restricted euxassay_012256_21
Specimen euxassay_012256_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: temporal bone petrous part Weak Regionally restricted euxassay_012256_22
TS23: cranial muscle Weak Regionally restricted euxassay_012256_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
01/06/2026
MGI 6.24 		The Jackson Laboratory