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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823650
Gene symbol: Cbfa2t2
Gene name: CBFA2/RUNX1 translocation partner 2
Probe: T55020
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019496_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019496_01
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_01
Specimen euxassay_019496_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019496_02
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_02
Specimen euxassay_019496_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019496_03
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_03
Specimen euxassay_019496_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_019496_04
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_04
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019496_04
Specimen euxassay_019496_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019496_05
TS23: lung Weak Regionally restricted euxassay_019496_05
Specimen euxassay_019496_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_019496_06
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019496_06
TS23: lung Weak Regionally restricted euxassay_019496_06
Specimen euxassay_019496_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_019496_07
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019496_07
TS23: lung Weak Regionally restricted euxassay_019496_07
Specimen euxassay_019496_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019496_08
TS23: vibrissa Weak Regionally restricted euxassay_019496_08
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019496_08
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019496_08
TS23: lung Weak Regionally restricted euxassay_019496_08
Specimen euxassay_019496_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019496_09
TS23: vibrissa Weak Regionally restricted euxassay_019496_09
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019496_09
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019496_09
TS23: lung Weak Regionally restricted euxassay_019496_09
Specimen euxassay_019496_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019496_10
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019496_10
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019496_10
TS23: lung Weak Regionally restricted euxassay_019496_10
Specimen euxassay_019496_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019496_11
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_019496_11
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019496_11
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_019496_11
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_019496_11
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019496_11
TS23: pituitary gland Moderate Regionally restricted euxassay_019496_11
TS23: lung Weak Regionally restricted euxassay_019496_11
Specimen euxassay_019496_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019496_12
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_019496_12
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019496_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019496_12
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019496_12
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019496_12
TS23: pituitary gland Weak Regionally restricted euxassay_019496_12
TS23: thyroid gland Weak Regionally restricted euxassay_019496_12
Specimen euxassay_019496_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019496_13
TS23: vomeronasal organ Strong Regionally restricted euxassay_019496_13
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019496_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019496_13
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019496_13
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019496_13
TS23: pituitary gland Moderate Regionally restricted euxassay_019496_13
TS23: thyroid gland Weak Regionally restricted euxassay_019496_13
TS23: lung Weak Regionally restricted euxassay_019496_13
Specimen euxassay_019496_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019496_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019496_14
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019496_14
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019496_14
TS23: pituitary gland Moderate Regionally restricted euxassay_019496_14
Specimen euxassay_019496_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019496_15
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_15
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019496_15
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019496_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019496_15
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019496_15
TS23: pituitary gland Moderate Regionally restricted euxassay_019496_15
Specimen euxassay_019496_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_019496_16
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_16
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019496_16
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_019496_16
TS23: pituitary gland Weak Regionally restricted euxassay_019496_16
Specimen euxassay_019496_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019496_17
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_17
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_019496_17
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019496_17
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019496_17
TS23: pituitary gland Weak Regionally restricted euxassay_019496_17
TS23: thyroid gland Moderate Regionally restricted euxassay_019496_17
TS23: lung Weak Regionally restricted euxassay_019496_17
Specimen euxassay_019496_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019496_18
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_18
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_019496_18
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_019496_18
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019496_18
TS23: lung Weak Regionally restricted euxassay_019496_18
Specimen euxassay_019496_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019496_19
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_19
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019496_19
TS23: lung Weak Regionally restricted euxassay_019496_19
Specimen euxassay_019496_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Strong Regionally restricted euxassay_019496_20
TS23: vibrissa Weak Regionally restricted euxassay_019496_20
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019496_20
TS23: lung Weak Regionally restricted euxassay_019496_20
Specimen euxassay_019496_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_019496_21
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_21
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019496_21
TS23: lung Weak Regionally restricted euxassay_019496_21
Specimen euxassay_019496_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_019496_22
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_22
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019496_22
TS23: lung Weak Regionally restricted euxassay_019496_22
Specimen euxassay_019496_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_019496_23
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_23
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_019496_23
TS23: lung Weak Regionally restricted euxassay_019496_23
Specimen euxassay_019496_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_019496_24
TS23: telencephalon ventricular layer Strong Uniform euxassay_019496_24
TS23: lung Weak Regionally restricted euxassay_019496_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory