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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823602
Gene symbol: Camk2a
Gene name: calcium/calmodulin-dependent protein kinase II alpha
Probe: MGC clone 25415
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001000_01: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_01
TS23: diaphragm Weak Regionally restricted euxassay_001000_01
TS23: limb Weak Regionally restricted euxassay_001000_01
TS23: limb musculature Present euxassay_001000_01
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001000_01
TS23: amygdala Present euxassay_001000_01
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_01
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_01
Specimen euxassay_001000_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_02
TS23: diaphragm Weak Regionally restricted euxassay_001000_02
TS23: limb Weak Regionally restricted euxassay_001000_02
TS23: limb musculature Present euxassay_001000_02
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001000_02
TS23: amygdala Present euxassay_001000_02
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_02
Specimen euxassay_001000_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_03
TS23: diaphragm Weak Regionally restricted euxassay_001000_03
TS23: limb Weak Regionally restricted euxassay_001000_03
TS23: limb musculature Present euxassay_001000_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001000_03
TS23: amygdala Present euxassay_001000_03
TS23: corpus striatum Present euxassay_001000_03
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_03
Specimen euxassay_001000_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_04
TS23: diaphragm Weak Regionally restricted euxassay_001000_04
TS23: limb Weak Regionally restricted euxassay_001000_04
TS23: limb musculature Present euxassay_001000_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001000_04
TS23: amygdala Present euxassay_001000_04
TS23: corpus striatum Present euxassay_001000_04
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_04
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_04
Specimen euxassay_001000_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_05
TS23: diaphragm Weak Regionally restricted euxassay_001000_05
TS23: limb Weak Regionally restricted euxassay_001000_05
TS23: limb musculature Present euxassay_001000_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001000_05
TS23: amygdala Present euxassay_001000_05
TS23: corpus striatum Present euxassay_001000_05
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_05
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_05
Specimen euxassay_001000_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_06
TS23: diaphragm Weak Regionally restricted euxassay_001000_06
TS23: limb Weak Regionally restricted euxassay_001000_06
TS23: limb musculature Present euxassay_001000_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001000_06
TS23: amygdala Present euxassay_001000_06
TS23: corpus striatum Present euxassay_001000_06
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_06
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_06
Specimen euxassay_001000_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_07
TS23: diaphragm Weak Regionally restricted euxassay_001000_07
TS23: heart Weak Uniform euxassay_001000_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001000_07
TS23: amygdala Present euxassay_001000_07
TS23: corpus striatum Present euxassay_001000_07
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_07
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_001000_07
Specimen euxassay_001000_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_08
TS23: diaphragm Weak Regionally restricted euxassay_001000_08
TS23: heart Weak Uniform euxassay_001000_08
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_08
TS23: amygdala Present euxassay_001000_08
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_08
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_08
TS23: thalamus mantle layer Weak Regionally restricted euxassay_001000_08
Specimen euxassay_001000_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_09
TS23: diaphragm Weak Regionally restricted euxassay_001000_09
TS23: heart Weak Uniform euxassay_001000_09
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_09
TS23: telencephalon septum Present euxassay_001000_09
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_09
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_09
TS23: thalamus mantle layer Weak Regionally restricted euxassay_001000_09
Specimen euxassay_001000_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_10
TS23: heart Weak Uniform euxassay_001000_10
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_10
TS23: telencephalon septum Present euxassay_001000_10
TS23: olfactory cortex marginal layer Weak Uniform euxassay_001000_10
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_001000_10
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_10
TS23: thalamus mantle layer Weak Regionally restricted euxassay_001000_10
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_001000_10
Specimen euxassay_001000_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_11
TS23: tongue Weak Regionally restricted euxassay_001000_11
TS23: heart Weak Uniform euxassay_001000_11
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_11
TS23: telencephalon septum Present euxassay_001000_11
TS23: olfactory cortex marginal layer Weak Uniform euxassay_001000_11
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_001000_11
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_11
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_001000_11
Specimen euxassay_001000_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_12
TS23: tongue Weak Regionally restricted euxassay_001000_12
TS23: thymus primordium Weak Uniform euxassay_001000_12
TS23: tail Weak Regionally restricted euxassay_001000_12 muscle
TS23: heart Weak Uniform euxassay_001000_12
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_12
TS23: telencephalon septum Present euxassay_001000_12
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_12
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_001000_12
TS23: olfactory cortex marginal layer Weak Uniform euxassay_001000_12
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_001000_12
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_001000_12
Specimen euxassay_001000_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_13
TS23: tongue Weak Regionally restricted euxassay_001000_13
TS23: thymus primordium Weak Uniform euxassay_001000_13
TS23: tail Weak Regionally restricted euxassay_001000_13 muscle
TS23: heart Weak Uniform euxassay_001000_13
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_13
TS23: telencephalon septum Present euxassay_001000_13
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_13
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_001000_13
Specimen euxassay_001000_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: tongue Weak Regionally restricted euxassay_001000_14
TS23: thymus primordium Weak Uniform euxassay_001000_14
TS23: tail Weak Regionally restricted euxassay_001000_14 muscle
TS23: heart Weak Uniform euxassay_001000_14
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_14
TS23: telencephalon septum Present euxassay_001000_14
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_14
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_001000_14
Specimen euxassay_001000_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: tongue Weak Regionally restricted euxassay_001000_15
TS23: thymus primordium Weak Uniform euxassay_001000_15
TS23: tail Weak Regionally restricted euxassay_001000_15 muscle
TS23: heart Weak Uniform euxassay_001000_15
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_15
TS23: telencephalon septum Present euxassay_001000_15
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_15
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_001000_15
TS23: olfactory cortex marginal layer Weak Uniform euxassay_001000_15
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_001000_15
Specimen euxassay_001000_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_16
TS23: tongue Weak Regionally restricted euxassay_001000_16
TS23: thymus primordium Weak Uniform euxassay_001000_16
TS23: tail Weak Regionally restricted euxassay_001000_16 muscle
TS23: heart Weak Uniform euxassay_001000_16
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_16
TS23: telencephalon septum Present euxassay_001000_16
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_001000_16
TS23: olfactory cortex marginal layer Weak Uniform euxassay_001000_16
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_16
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_16
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_001000_16
TS23: thalamus mantle layer Weak Regionally restricted euxassay_001000_16
Specimen euxassay_001000_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_17
TS23: tail Weak Regionally restricted euxassay_001000_17 muscle
TS23: heart Weak Uniform euxassay_001000_17
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_17
TS23: telencephalon septum Present euxassay_001000_17
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_17
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_001000_17
TS23: olfactory cortex marginal layer Weak Uniform euxassay_001000_17
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_17
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_001000_17
TS23: thalamus mantle layer Weak Regionally restricted euxassay_001000_17
Specimen euxassay_001000_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_18
TS23: amygdala Present euxassay_001000_18
TS23: olfactory cortex marginal layer Weak Uniform euxassay_001000_18
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_001000_18
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_18
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_18
TS23: thalamus mantle layer Weak Regionally restricted euxassay_001000_18
Specimen euxassay_001000_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_19
TS23: diaphragm Weak Regionally restricted euxassay_001000_19
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_19
TS23: amygdala Present euxassay_001000_19
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_19
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_19
TS23: thalamus mantle layer Weak Regionally restricted euxassay_001000_19
Specimen euxassay_001000_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_20
TS23: diaphragm Weak Regionally restricted euxassay_001000_20
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_20
TS23: amygdala Present euxassay_001000_20
TS23: corpus striatum Present euxassay_001000_20
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_20
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_20
Specimen euxassay_001000_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_21
TS23: diaphragm Weak Regionally restricted euxassay_001000_21
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_21
TS23: amygdala Present euxassay_001000_21
TS23: corpus striatum Present euxassay_001000_21
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_21
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_21
Specimen euxassay_001000_22: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_22
TS23: diaphragm Weak Regionally restricted euxassay_001000_22
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_22
TS23: amygdala Present euxassay_001000_22
TS23: corpus striatum Present euxassay_001000_22
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_22
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_22
Specimen euxassay_001000_23: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_23
TS23: diaphragm Weak Regionally restricted euxassay_001000_23
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_23
TS23: amygdala Present euxassay_001000_23
TS23: corpus striatum Present euxassay_001000_23
TS23: telencephalon ventricular layer Weak Uniform euxassay_001000_23
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_23
Specimen euxassay_001000_24: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Single cells euxassay_001000_24
TS23: diaphragm Weak Regionally restricted euxassay_001000_24
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_001000_24
TS23: amygdala Present euxassay_001000_24
TS23: corpus striatum Present euxassay_001000_24
TS23: cerebral cortex marginal layer Weak Uniform euxassay_001000_24
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory