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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823489
Gene symbol: Bnip3
Gene name: BCL2/adenovirus E1B interacting protein 3
Probe: MGC clone 54681
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004164_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_01
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_004164_01
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_004164_01
TS23: forearm mesenchyme Moderate Regionally restricted euxassay_004164_01
TS23: upper arm mesenchyme Moderate Regionally restricted euxassay_004164_01
TS23: forelimb digit 1 mesenchyme Moderate Regionally restricted euxassay_004164_01
TS23: forelimb digit 2 mesenchyme Moderate Regionally restricted euxassay_004164_01
Specimen euxassay_004164_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_02
TS23: foot mesenchyme Moderate Regionally restricted euxassay_004164_02
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_004164_02
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_004164_02
TS23: forelimb digit 3 mesenchyme Moderate Regionally restricted euxassay_004164_02
TS23: forelimb digit 2 mesenchyme Moderate Regionally restricted euxassay_004164_02
TS23: forelimb digit 1 mesenchyme Moderate Regionally restricted euxassay_004164_02
TS23: forearm mesenchyme Moderate Regionally restricted euxassay_004164_02
TS23: upper arm mesenchyme Moderate Regionally restricted euxassay_004164_02
Specimen euxassay_004164_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_03
TS23: upper leg mesenchyme Moderate Regionally restricted euxassay_004164_03
TS23: lower leg mesenchyme Moderate Regionally restricted euxassay_004164_03
TS23: foot mesenchyme Moderate Regionally restricted euxassay_004164_03
TS23: upper arm mesenchyme Moderate Regionally restricted euxassay_004164_03
TS23: forelimb digit 3 mesenchyme Moderate Regionally restricted euxassay_004164_03
TS23: forelimb digit 2 mesenchyme Moderate Regionally restricted euxassay_004164_03
TS23: forelimb digit 1 mesenchyme Moderate Regionally restricted euxassay_004164_03
Specimen euxassay_004164_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_04
TS23: stomach Moderate Regionally restricted euxassay_004164_04
TS23: foot mesenchyme Moderate Regionally restricted euxassay_004164_04
TS23: forelimb digit 1 mesenchyme Moderate Regionally restricted euxassay_004164_04
TS23: forelimb digit 2 mesenchyme Moderate Regionally restricted euxassay_004164_04
TS23: forelimb digit 3 mesenchyme Moderate Regionally restricted euxassay_004164_04
Specimen euxassay_004164_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_05
TS23: stomach Moderate Regionally restricted euxassay_004164_05
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_004164_05
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_004164_05
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_004164_05
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_004164_05
TS23: forelimb digit 3 mesenchyme Moderate Regionally restricted euxassay_004164_05
Specimen euxassay_004164_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_06
TS23: stomach Moderate Regionally restricted euxassay_004164_06
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_004164_06
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_004164_06
TS23: hindlimb digit 5 mesenchyme Moderate Regionally restricted euxassay_004164_06
Specimen euxassay_004164_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart ventricle Moderate Regionally restricted euxassay_004164_07
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_07
TS23: stomach Moderate Regionally restricted euxassay_004164_07
TS23: midgut Moderate Regionally restricted euxassay_004164_07
Specimen euxassay_004164_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart ventricle Moderate Regionally restricted euxassay_004164_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004164_08
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_08
TS23: midgut Moderate Regionally restricted euxassay_004164_08
Specimen euxassay_004164_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart ventricle Moderate Regionally restricted euxassay_004164_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004164_09
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_09
TS23: clavicle Strong Regionally restricted euxassay_004164_09
TS23: midgut Moderate Regionally restricted euxassay_004164_09
Specimen euxassay_004164_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart ventricle Moderate Regionally restricted euxassay_004164_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004164_10
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_10
TS23: clavicle Strong Regionally restricted euxassay_004164_10
TS23: midgut Moderate Regionally restricted euxassay_004164_10
Specimen euxassay_004164_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart ventricle Moderate Regionally restricted euxassay_004164_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004164_11
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_004164_11
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_11
TS23: midgut Moderate Regionally restricted euxassay_004164_11
Specimen euxassay_004164_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart ventricle Moderate Regionally restricted euxassay_004164_12
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_12
TS23: midgut Moderate Regionally restricted euxassay_004164_12
Specimen euxassay_004164_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart ventricle Moderate Regionally restricted euxassay_004164_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004164_13
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_13
TS23: midgut Moderate Regionally restricted euxassay_004164_13
TS23: axial skeleton tail region Strong Regionally restricted euxassay_004164_13
Specimen euxassay_004164_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart ventricle Moderate Regionally restricted euxassay_004164_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004164_14
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_14
TS23: midgut Moderate Regionally restricted euxassay_004164_14
TS23: axial skeleton tail region Strong Regionally restricted euxassay_004164_14
Specimen euxassay_004164_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart ventricle Moderate Regionally restricted euxassay_004164_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004164_15
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_15
TS23: midgut Moderate Regionally restricted euxassay_004164_15
TS23: axial skeleton tail region Strong Regionally restricted euxassay_004164_15
Specimen euxassay_004164_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart ventricle Moderate Regionally restricted euxassay_004164_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004164_16
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_004164_16
TS23: external naris epithelium Moderate Regionally restricted euxassay_004164_16
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_16
TS23: clavicle Strong Regionally restricted euxassay_004164_16
TS23: midgut Moderate Regionally restricted euxassay_004164_16
TS23: axial skeleton tail region Strong Regionally restricted euxassay_004164_16
Specimen euxassay_004164_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart ventricle Moderate Regionally restricted euxassay_004164_17
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_004164_17
TS23: external naris epithelium Moderate Regionally restricted euxassay_004164_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004164_17
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_17
TS23: clavicle Strong Regionally restricted euxassay_004164_17
TS23: midgut Moderate Regionally restricted euxassay_004164_17
TS23: axial skeleton tail region Strong Regionally restricted euxassay_004164_17
TS23: hindlimb digit 5 mesenchyme Moderate Regionally restricted euxassay_004164_17
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_004164_17
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_004164_17
Specimen euxassay_004164_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Moderate Regionally restricted euxassay_004164_18
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_18
TS23: axial skeleton tail region Strong Regionally restricted euxassay_004164_18
TS23: hindlimb digit 5 mesenchyme Moderate Regionally restricted euxassay_004164_18
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_004164_18
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_004164_18
Specimen euxassay_004164_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_19
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_004164_19
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_004164_19
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_004164_19
Specimen euxassay_004164_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_20
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_004164_20
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_004164_20
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_004164_20
Specimen euxassay_004164_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_21
Specimen euxassay_004164_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_22
Specimen euxassay_004164_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_004164_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory