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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823392
Gene symbol: Barhl2
Gene name: BarH like homeobox 2
Probe: T55035
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019614_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_019614_01
Specimen euxassay_019614_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019614_02
Specimen euxassay_019614_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019614_03
Specimen euxassay_019614_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019614_04
Specimen euxassay_019614_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019614_05
Specimen euxassay_019614_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019614_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019614_07
Specimen euxassay_019614_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_019614_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019614_08
Specimen euxassay_019614_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019614_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019614_09
Specimen euxassay_019614_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019614_10
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_019614_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019614_10
TS23: intermediate grey horn Strong Regionally restricted euxassay_019614_10
Specimen euxassay_019614_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_019614_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_019614_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019614_11
TS23: intermediate grey horn Strong Regionally restricted euxassay_019614_11
Specimen euxassay_019614_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_019614_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019614_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019614_12
TS23: intermediate grey horn Weak Regionally restricted euxassay_019614_12
Specimen euxassay_019614_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019614_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019614_13
TS23: intermediate grey horn Weak Regionally restricted euxassay_019614_13
Specimen euxassay_019614_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_019614_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019614_14
TS23: intermediate grey horn Weak Regionally restricted euxassay_019614_14
Specimen euxassay_019614_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019614_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019614_15
TS23: intermediate grey horn Moderate Regionally restricted euxassay_019614_15
Specimen euxassay_019614_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_019614_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019614_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_019614_16
TS23: intermediate grey horn Moderate Regionally restricted euxassay_019614_16
Specimen euxassay_019614_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_019614_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_019614_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019614_17
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_019614_17
Specimen euxassay_019614_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Weak Regionally restricted euxassay_019614_18
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_019614_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_019614_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_019614_18
Specimen euxassay_019614_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_019614_21
Specimen euxassay_019614_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019614_22
Specimen euxassay_019614_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_019614_23
Specimen euxassay_019614_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_019614_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory