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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823321
Gene symbol: Atp6v0c
Gene name: ATPase, H+ transporting, lysosomal V0 subunit C
Probe: T35961
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009616_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forebrain Moderate Regionally restricted euxassay_009616_01
Specimen euxassay_009616_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_02
TS23: mandible Moderate Regionally restricted euxassay_009616_02
TS23: neural retina Moderate Regionally restricted euxassay_009616_02
TS23: forebrain Moderate Regionally restricted euxassay_009616_02
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009616_02
Specimen euxassay_009616_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_03
TS23: facial ganglion Strong Regionally restricted euxassay_009616_03
TS23: mandible Moderate Regionally restricted euxassay_009616_03
TS23: hindbrain Moderate Regionally restricted euxassay_009616_03
TS23: forebrain Moderate Regionally restricted euxassay_009616_03
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009616_03
Specimen euxassay_009616_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_04
TS23: facial ganglion Strong Regionally restricted euxassay_009616_04
TS23: mandible Moderate Regionally restricted euxassay_009616_04
TS23: maxilla Moderate Regionally restricted euxassay_009616_04
TS23: hindbrain Moderate Regionally restricted euxassay_009616_04
TS23: forebrain Moderate Regionally restricted euxassay_009616_04
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009616_04
Specimen euxassay_009616_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_05
TS23: facial ganglion Strong Regionally restricted euxassay_009616_05
TS23: maxilla Moderate Regionally restricted euxassay_009616_05
TS23: mandible Moderate Regionally restricted euxassay_009616_05
TS23: forebrain Moderate Regionally restricted euxassay_009616_05
TS23: hindbrain Moderate Regionally restricted euxassay_009616_05
Specimen euxassay_009616_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_06
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009616_06
TS23: facial ganglion Strong Regionally restricted euxassay_009616_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_009616_06
TS23: mandible Weak Regionally restricted euxassay_009616_06
TS23: maxilla Weak Regionally restricted euxassay_009616_06
TS23: midbrain Moderate Regionally restricted euxassay_009616_06
TS23: hindbrain Moderate Regionally restricted euxassay_009616_06
TS23: forebrain Moderate Regionally restricted euxassay_009616_06
Specimen euxassay_009616_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_009616_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009616_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009616_07
TS23: maxilla Weak Regionally restricted euxassay_009616_07
TS23: mandible Weak Regionally restricted euxassay_009616_07
TS23: midbrain Moderate Regionally restricted euxassay_009616_07
TS23: hindbrain Moderate Regionally restricted euxassay_009616_07
TS23: forebrain Moderate Regionally restricted euxassay_009616_07
Specimen euxassay_009616_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_009616_08
TS23: vagus ganglion Strong Regionally restricted euxassay_009616_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009616_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009616_08
TS23: maxilla Weak Regionally restricted euxassay_009616_08
TS23: mandible Weak Regionally restricted euxassay_009616_08
TS23: spinal cord Moderate Regionally restricted euxassay_009616_08
TS23: midbrain Moderate Regionally restricted euxassay_009616_08
TS23: hindbrain Moderate Regionally restricted euxassay_009616_08
TS23: forebrain Moderate Regionally restricted euxassay_009616_08
Specimen euxassay_009616_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_009616_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009616_09
TS23: maxilla Weak Regionally restricted euxassay_009616_09
TS23: mandible Weak Regionally restricted euxassay_009616_09
TS23: cervical ganglion Moderate Regionally restricted euxassay_009616_09
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_009616_09
TS23: spinal cord Moderate Regionally restricted euxassay_009616_09
TS23: midbrain Moderate Regionally restricted euxassay_009616_09
TS23: hindbrain Moderate Regionally restricted euxassay_009616_09
TS23: forebrain Moderate Regionally restricted euxassay_009616_09
Specimen euxassay_009616_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Weak Regionally restricted euxassay_009616_10
TS23: mandible Weak Regionally restricted euxassay_009616_10
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_009616_10
TS23: thoracic ganglion Moderate Regionally restricted euxassay_009616_10
TS23: spinal cord Moderate Regionally restricted euxassay_009616_10
TS23: midbrain Moderate Regionally restricted euxassay_009616_10
TS23: hindbrain Moderate Regionally restricted euxassay_009616_10
TS23: forebrain Moderate Regionally restricted euxassay_009616_10
Specimen euxassay_009616_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_009616_11
TS23: thoracic ganglion Moderate Regionally restricted euxassay_009616_11
TS23: spinal cord Moderate Regionally restricted euxassay_009616_11
TS23: hindbrain Moderate Regionally restricted euxassay_009616_11
TS23: midbrain Moderate Regionally restricted euxassay_009616_11
TS23: forebrain Moderate Regionally restricted euxassay_009616_11
Specimen euxassay_009616_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009616_12
TS23: spinal cord Moderate Regionally restricted euxassay_009616_12
TS23: midbrain Moderate Regionally restricted euxassay_009616_12
TS23: hindbrain Moderate Regionally restricted euxassay_009616_12
TS23: forebrain Moderate Regionally restricted euxassay_009616_12
Specimen euxassay_009616_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009616_13
TS23: spinal cord Moderate Regionally restricted euxassay_009616_13
TS23: midbrain Moderate Regionally restricted euxassay_009616_13
TS23: hindbrain Moderate Regionally restricted euxassay_009616_13
TS23: forebrain Moderate Regionally restricted euxassay_009616_13
Specimen euxassay_009616_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009616_14
TS23: maxilla Weak Regionally restricted euxassay_009616_14
TS23: mandible Weak Regionally restricted euxassay_009616_14
TS23: spinal cord Moderate Regionally restricted euxassay_009616_14
TS23: midbrain Moderate Regionally restricted euxassay_009616_14
TS23: hindbrain Moderate Regionally restricted euxassay_009616_14
TS23: forebrain Moderate Regionally restricted euxassay_009616_14
Specimen euxassay_009616_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009616_15
TS23: maxilla Weak Regionally restricted euxassay_009616_15
TS23: mandible Weak Regionally restricted euxassay_009616_15
TS23: spinal cord Moderate Regionally restricted euxassay_009616_15
TS23: midbrain Moderate Regionally restricted euxassay_009616_15
TS23: hindbrain Moderate Regionally restricted euxassay_009616_15
TS23: forebrain Moderate Regionally restricted euxassay_009616_15
Specimen euxassay_009616_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_009616_16
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009616_16
TS23: maxilla Weak Regionally restricted euxassay_009616_16
TS23: mandible Weak Regionally restricted euxassay_009616_16
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_009616_16
TS23: cervical ganglion Moderate Regionally restricted euxassay_009616_16
TS23: midbrain Moderate Regionally restricted euxassay_009616_16
TS23: hindbrain Moderate Regionally restricted euxassay_009616_16
TS23: forebrain Moderate Regionally restricted euxassay_009616_16
TS23: spinal cord Moderate Regionally restricted euxassay_009616_16
Specimen euxassay_009616_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_009616_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_009616_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009616_17
TS23: maxilla Weak Regionally restricted euxassay_009616_17
TS23: mandible Weak Regionally restricted euxassay_009616_17
TS23: midbrain Moderate Regionally restricted euxassay_009616_17
TS23: hindbrain Moderate Regionally restricted euxassay_009616_17
TS23: forebrain Moderate Regionally restricted euxassay_009616_17
Specimen euxassay_009616_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009616_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_009616_18
TS23: facial ganglion Strong Regionally restricted euxassay_009616_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_009616_18
TS23: maxilla Weak Regionally restricted euxassay_009616_18
TS23: mandible Weak Regionally restricted euxassay_009616_18
TS23: midbrain Moderate Regionally restricted euxassay_009616_18
TS23: hindbrain Moderate Regionally restricted euxassay_009616_18
TS23: forebrain Moderate Regionally restricted euxassay_009616_18
Specimen euxassay_009616_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_009616_19
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_009616_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_19
TS23: facial ganglion Strong Regionally restricted euxassay_009616_19
TS23: maxilla Weak Regionally restricted euxassay_009616_19
TS23: mandible Weak Regionally restricted euxassay_009616_19
TS23: midbrain Moderate Regionally restricted euxassay_009616_19
TS23: hindbrain Moderate Regionally restricted euxassay_009616_19
TS23: forebrain Moderate Regionally restricted euxassay_009616_19
Specimen euxassay_009616_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_20
TS23: facial ganglion Strong Regionally restricted euxassay_009616_20
TS23: maxilla Weak Regionally restricted euxassay_009616_20
TS23: mandible Weak Regionally restricted euxassay_009616_20
TS23: midbrain Moderate Regionally restricted euxassay_009616_20
TS23: hindbrain Moderate Regionally restricted euxassay_009616_20
TS23: forebrain Moderate Regionally restricted euxassay_009616_20
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009616_20
Specimen euxassay_009616_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_21
TS23: facial ganglion Strong Regionally restricted euxassay_009616_21
TS23: mandible Weak Regionally restricted euxassay_009616_21
TS23: hindbrain Moderate Regionally restricted euxassay_009616_21
TS23: forebrain Moderate Regionally restricted euxassay_009616_21
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009616_21
Specimen euxassay_009616_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_009616_22
TS23: mandible Weak Regionally restricted euxassay_009616_22
TS23: neural retina Strong Regionally restricted euxassay_009616_22
TS23: forebrain Moderate Regionally restricted euxassay_009616_22
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_009616_22
Specimen euxassay_009616_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_009616_23
TS23: forebrain Moderate Regionally restricted euxassay_009616_23
Specimen euxassay_009616_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_009616_24
TS23: forebrain Moderate Regionally restricted euxassay_009616_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
01/28/2026
MGI 6.24 		The Jackson Laboratory