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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823299
Gene symbol: Atoh1
Gene name: atonal bHLH transcription factor 1
Probe: MGC clone 58933
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001631_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_02
Specimen euxassay_001631_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_03
Specimen euxassay_001631_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_04
Specimen euxassay_001631_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_05
Specimen euxassay_001631_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_06
Specimen euxassay_001631_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_07
Specimen euxassay_001631_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_08
Specimen euxassay_001631_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_09
Specimen euxassay_001631_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_10
Specimen euxassay_001631_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_12
TS23: midgut Moderate Regionally restricted euxassay_001631_12
TS23: hindgut Moderate Regionally restricted euxassay_001631_12
Specimen euxassay_001631_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_13
TS23: midgut Moderate Regionally restricted euxassay_001631_13
Specimen euxassay_001631_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_14
TS23: midgut Moderate Regionally restricted euxassay_001631_14
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_001631_14
Specimen euxassay_001631_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_15
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_001631_15
TS23: midgut Moderate Regionally restricted euxassay_001631_15
Specimen euxassay_001631_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_16
Specimen euxassay_001631_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_17
Specimen euxassay_001631_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_18
Specimen euxassay_001631_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_19
Specimen euxassay_001631_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_20
Specimen euxassay_001631_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon rest of alar plate marginal layer Strong Regionally restricted euxassay_001631_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory