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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823235
Gene symbol: Arid5a
Gene name: AT-rich interaction domain 5A
Probe: T55006
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019589_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019589_01
Specimen euxassay_019589_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_019589_02
Specimen euxassay_019589_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_019589_03
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_03
Specimen euxassay_019589_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_04
Specimen euxassay_019589_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_05
TS23: facial ganglion Strong Regionally restricted euxassay_019589_05
Specimen euxassay_019589_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_06
Specimen euxassay_019589_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019589_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019589_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019589_07
Specimen euxassay_019589_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019589_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019589_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019589_08
Specimen euxassay_019589_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019589_09
Specimen euxassay_019589_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019589_10
Specimen euxassay_019589_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019589_11
Specimen euxassay_019589_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019589_12
Specimen euxassay_019589_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019589_13
TS23: ventral grey horn Weak Regionally restricted euxassay_019589_13
Specimen euxassay_019589_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Weak Regionally restricted euxassay_019589_14
Specimen euxassay_019589_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Weak Regionally restricted euxassay_019589_16
Specimen euxassay_019589_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019589_17
TS23: ventral grey horn Moderate Regionally restricted euxassay_019589_17
Specimen euxassay_019589_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019589_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019589_18
Specimen euxassay_019589_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_019589_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_19
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_019589_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_019589_19
Specimen euxassay_019589_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_20
TS23: facial ganglion Strong Regionally restricted euxassay_019589_20
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_019589_20
Specimen euxassay_019589_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_21
TS23: facial ganglion Strong Regionally restricted euxassay_019589_21
Specimen euxassay_019589_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_22
TS23: facial ganglion Strong Regionally restricted euxassay_019589_22
Specimen euxassay_019589_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_019589_23
TS23: trigeminal ganglion Strong Regionally restricted euxassay_019589_23
Specimen euxassay_019589_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_019589_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory