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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823024
Gene symbol: Agap1
Gene name: ArfGAP with GTPase domain, ankyrin repeat and PH domain 1
Probe: T63004
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_015873_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_01
Specimen euxassay_015873_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_015873_02
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_02
Specimen euxassay_015873_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_015873_03
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_03
Specimen euxassay_015873_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015873_04
TS23: neural retina Weak Regionally restricted euxassay_015873_04
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_04
TS23: cerebellum Weak Regionally restricted euxassay_015873_04
Specimen euxassay_015873_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015873_05
TS23: facial ganglion Weak Regionally restricted euxassay_015873_05
TS23: neural retina Weak Regionally restricted euxassay_015873_05
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_05
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_05
TS23: cerebellum Weak Regionally restricted euxassay_015873_05
Specimen euxassay_015873_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015873_06
TS23: facial ganglion Weak Regionally restricted euxassay_015873_06
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_06
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_06
TS23: cerebellum Weak Regionally restricted euxassay_015873_06
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_06
Specimen euxassay_015873_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015873_07
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_015873_07
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_015873_07
TS23: dorsal root ganglion Weak Regionally restricted euxassay_015873_07
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_07
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_07
TS23: medulla oblongata Weak Regionally restricted euxassay_015873_07
TS23: cerebellum Weak Regionally restricted euxassay_015873_07
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_07
Specimen euxassay_015873_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015873_08
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_08
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_08
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015873_08
TS23: medulla oblongata Weak Regionally restricted euxassay_015873_08
TS23: cerebellum Weak Regionally restricted euxassay_015873_08
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_08
Specimen euxassay_015873_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Weak Regionally restricted euxassay_015873_09
TS23: upper jaw molar Weak Regionally restricted euxassay_015873_09
TS23: lower jaw molar Weak Regionally restricted euxassay_015873_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015873_09
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_09
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_09
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_09
TS23: cerebellum Weak Regionally restricted euxassay_015873_09
TS23: medulla oblongata Weak Regionally restricted euxassay_015873_09
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_015873_09
Specimen euxassay_015873_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_015873_10
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_015873_10
TS23: cervical ganglion Weak Regionally restricted euxassay_015873_10
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_10
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_10
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015873_10
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_10
TS23: cerebellum Weak Regionally restricted euxassay_015873_10
TS23: medulla oblongata Weak Regionally restricted euxassay_015873_10
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_015873_10
Specimen euxassay_015873_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_015873_11
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_11
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015873_11
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_11
TS23: cerebellum Weak Regionally restricted euxassay_015873_11
TS23: medulla oblongata Weak Regionally restricted euxassay_015873_11
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_015873_11
Specimen euxassay_015873_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_015873_12
TS23: thoracic ganglion Weak Regionally restricted euxassay_015873_12
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_12
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_12
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015873_12
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_12
TS23: cerebellum Weak Regionally restricted euxassay_015873_12
TS23: medulla oblongata Weak Regionally restricted euxassay_015873_12
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_015873_12
Specimen euxassay_015873_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory epithelium Weak Regionally restricted euxassay_015873_13
TS23: upper jaw incisor Weak Regionally restricted euxassay_015873_13
TS23: lower jaw incisor Weak Regionally restricted euxassay_015873_13
TS23: thoracic ganglion Weak Regionally restricted euxassay_015873_13
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_13
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_13
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015873_13
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_13
TS23: cerebellum Weak Regionally restricted euxassay_015873_13
TS23: medulla oblongata Weak Regionally restricted euxassay_015873_13
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_015873_13
Specimen euxassay_015873_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_015873_14
TS23: vomeronasal organ Weak Regionally restricted euxassay_015873_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_015873_14
TS23: upper jaw incisor Weak Regionally restricted euxassay_015873_14
TS23: lower jaw incisor Weak Regionally restricted euxassay_015873_14
TS23: thoracic ganglion Weak Regionally restricted euxassay_015873_14
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_14
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_14
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015873_14
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_14
TS23: cerebellum Weak Regionally restricted euxassay_015873_14
TS23: medulla oblongata Weak Regionally restricted euxassay_015873_14
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_015873_14
Specimen euxassay_015873_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_015873_15
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_15
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_15
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015873_15
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_15
TS23: cerebellum Weak Regionally restricted euxassay_015873_15
TS23: medulla oblongata Weak Regionally restricted euxassay_015873_15
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_015873_15
Specimen euxassay_015873_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_015873_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_015873_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_16
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_16
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015873_16
TS23: medulla oblongata Weak Regionally restricted euxassay_015873_16
TS23: cerebellum Weak Regionally restricted euxassay_015873_16
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_16
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_015873_16
Specimen euxassay_015873_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_015873_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_015873_17
TS23: vomeronasal organ Weak Regionally restricted euxassay_015873_17
TS23: upper jaw incisor Weak Regionally restricted euxassay_015873_17
TS23: lower jaw incisor Weak Regionally restricted euxassay_015873_17
TS23: cervical ganglion Weak Regionally restricted euxassay_015873_17
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_015873_17
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_17
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_17
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015873_17
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_17
TS23: cerebellum Weak Regionally restricted euxassay_015873_17
TS23: medulla oblongata Weak Regionally restricted euxassay_015873_17
Specimen euxassay_015873_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vagus ganglion Weak Regionally restricted euxassay_015873_18
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_015873_18
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_015873_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015873_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_015873_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_015873_18
TS23: upper jaw incisor Weak Regionally restricted euxassay_015873_18
TS23: lower jaw incisor Weak Regionally restricted euxassay_015873_18
TS23: midbrain mantle layer Weak Regionally restricted euxassay_015873_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_18
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_015873_18
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_18
TS23: cerebellum Weak Regionally restricted euxassay_015873_18
TS23: medulla oblongata Weak Regionally restricted euxassay_015873_18
Specimen euxassay_015873_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_015873_19
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015873_19
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_015873_19
TS23: olfactory epithelium Weak Regionally restricted euxassay_015873_19
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_19
TS23: cerebellum Weak Regionally restricted euxassay_015873_19
TS23: metencephalon basal plate Weak Regionally restricted euxassay_015873_19
Specimen euxassay_015873_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015873_20
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_20
TS23: cerebellum Weak Regionally restricted euxassay_015873_20
Specimen euxassay_015873_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015873_21
TS23: facial ganglion Weak Regionally restricted euxassay_015873_21
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_21
TS23: cerebellum Weak Regionally restricted euxassay_015873_21
Specimen euxassay_015873_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015873_22
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_22
Specimen euxassay_015873_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_015873_23
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_23
Specimen euxassay_015873_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_015873_24
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_015873_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory