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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822888
Gene symbol: Abr
Gene name: active BCR-related gene
Probe: MGC clone 76339
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008421_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_01
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_01
TS23: liver Moderate Spotted euxassay_008421_01
TS23: rib Strong Regionally restricted euxassay_008421_01
TS23: peritoneum Moderate Regionally restricted euxassay_008421_01
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_01
Specimen euxassay_008421_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_02
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_02
TS23: liver Moderate Spotted euxassay_008421_02
TS23: stomach Moderate Regionally restricted euxassay_008421_02
TS23: rib Strong Regionally restricted euxassay_008421_02
TS23: peritoneum Moderate Regionally restricted euxassay_008421_02
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_02
Specimen euxassay_008421_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_03
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_03
TS23: liver Moderate Spotted euxassay_008421_03
TS23: stomach Moderate Regionally restricted euxassay_008421_03
TS23: rib Strong Regionally restricted euxassay_008421_03
TS23: peritoneum Moderate Regionally restricted euxassay_008421_03
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_03
Specimen euxassay_008421_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_04
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008421_04
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_04
TS23: liver Moderate Spotted euxassay_008421_04
TS23: stomach Strong Regionally restricted euxassay_008421_04
TS23: rib Strong Regionally restricted euxassay_008421_04
TS23: left lung Moderate Regionally restricted euxassay_008421_04
TS23: pleura Strong Regionally restricted euxassay_008421_04
TS23: peritoneum Moderate Regionally restricted euxassay_008421_04
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_04
Specimen euxassay_008421_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_05
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_008421_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008421_05
TS23: facial ganglion Strong Regionally restricted euxassay_008421_05
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_05
TS23: liver Moderate Spotted euxassay_008421_05
TS23: stomach Strong Regionally restricted euxassay_008421_05
TS23: rib Strong Regionally restricted euxassay_008421_05
TS23: left lung Moderate Regionally restricted euxassay_008421_05
TS23: pleura Strong Regionally restricted euxassay_008421_05
TS23: peritoneum Moderate Regionally restricted euxassay_008421_05
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_05
Specimen euxassay_008421_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_06
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_008421_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008421_06
TS23: facial ganglion Strong Regionally restricted euxassay_008421_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008421_06
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_06
TS23: liver Moderate Spotted euxassay_008421_06
TS23: stomach Strong Regionally restricted euxassay_008421_06
TS23: rib Strong Regionally restricted euxassay_008421_06
TS23: left lung Moderate Regionally restricted euxassay_008421_06
TS23: pleura Strong Regionally restricted euxassay_008421_06
TS23: peritoneum Moderate Regionally restricted euxassay_008421_06
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_06
Specimen euxassay_008421_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_07
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_008421_07
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008421_07
TS23: facial ganglion Strong Regionally restricted euxassay_008421_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008421_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_008421_07
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_07
TS23: renal cortex Strong Regionally restricted euxassay_008421_07
TS23: liver Moderate Spotted euxassay_008421_07
TS23: stomach Strong Regionally restricted euxassay_008421_07
TS23: rib Strong Regionally restricted euxassay_008421_07
TS23: left lung Moderate Regionally restricted euxassay_008421_07
TS23: pleura Strong Regionally restricted euxassay_008421_07
TS23: peritoneum Moderate Regionally restricted euxassay_008421_07
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_07
Specimen euxassay_008421_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_08
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_008421_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008421_08
TS23: facial ganglion Strong Regionally restricted euxassay_008421_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008421_08
TS23: vagus ganglion Strong Regionally restricted euxassay_008421_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008421_08
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_08
TS23: renal cortex Strong Regionally restricted euxassay_008421_08
TS23: liver Moderate Spotted euxassay_008421_08
TS23: stomach Strong Regionally restricted euxassay_008421_08
TS23: midgut Strong Regionally restricted euxassay_008421_08
TS23: rib Strong Regionally restricted euxassay_008421_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_008421_08
TS23: left lung Moderate Regionally restricted euxassay_008421_08
TS23: pleura Strong Regionally restricted euxassay_008421_08
TS23: peritoneum Moderate Regionally restricted euxassay_008421_08
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_08
Specimen euxassay_008421_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_008421_09
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_008421_09
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008421_09
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008421_09
TS23: vagus ganglion Strong Regionally restricted euxassay_008421_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008421_09
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_09
TS23: renal cortex Strong Regionally restricted euxassay_008421_09
TS23: liver Moderate Spotted euxassay_008421_09
TS23: stomach Strong Regionally restricted euxassay_008421_09
TS23: midgut Strong Regionally restricted euxassay_008421_09
TS23: rib Strong Regionally restricted euxassay_008421_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_008421_09
TS23: left lung Moderate Regionally restricted euxassay_008421_09
TS23: pleura Strong Regionally restricted euxassay_008421_09
TS23: peritoneum Moderate Regionally restricted euxassay_008421_09
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_09
Specimen euxassay_008421_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_10
TS23: spinal cord Strong Regionally restricted euxassay_008421_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_008421_10
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_008421_10
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008421_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008421_10
TS23: cervical ganglion Moderate Regionally restricted euxassay_008421_10
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_10
TS23: renal cortex Strong Regionally restricted euxassay_008421_10
TS23: liver Moderate Spotted euxassay_008421_10
TS23: stomach Strong Regionally restricted euxassay_008421_10
TS23: midgut Strong Regionally restricted euxassay_008421_10
TS23: rib Strong Regionally restricted euxassay_008421_10
TS23: submandibular gland primordium Strong Regionally restricted euxassay_008421_10
TS23: left lung Moderate Regionally restricted euxassay_008421_10
TS23: pleura Strong Regionally restricted euxassay_008421_10
TS23: peritoneum Moderate Regionally restricted euxassay_008421_10
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_10
Specimen euxassay_008421_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_11
TS23: spinal cord Strong Regionally restricted euxassay_008421_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_008421_11
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_008421_11
TS23: trigeminal nerve Strong Regionally restricted euxassay_008421_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008421_11
TS23: cervical ganglion Moderate Regionally restricted euxassay_008421_11
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_008421_11
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_11
TS23: renal cortex Strong Regionally restricted euxassay_008421_11
TS23: liver Moderate Spotted euxassay_008421_11
TS23: stomach Strong Regionally restricted euxassay_008421_11
TS23: midgut Strong Regionally restricted euxassay_008421_11
TS23: rib Strong Regionally restricted euxassay_008421_11
TS23: submandibular gland primordium Strong Regionally restricted euxassay_008421_11
TS23: left lung Moderate Regionally restricted euxassay_008421_11
TS23: pleura Strong Regionally restricted euxassay_008421_11
TS23: peritoneum Moderate Regionally restricted euxassay_008421_11
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_11
Specimen euxassay_008421_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_12
TS23: spinal cord Strong Regionally restricted euxassay_008421_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_008421_12
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_12
TS23: renal cortex Strong Regionally restricted euxassay_008421_12
TS23: liver Moderate Spotted euxassay_008421_12
TS23: midgut Moderate Regionally restricted euxassay_008421_12
TS23: thymus primordium Moderate Regionally restricted euxassay_008421_12
TS23: left lung Moderate Regionally restricted euxassay_008421_12
TS23: right lung Moderate Regionally restricted euxassay_008421_12
TS23: pleura Strong Regionally restricted euxassay_008421_12
TS23: peritoneum Moderate Regionally restricted euxassay_008421_12
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_12
Specimen euxassay_008421_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_13
TS23: spinal cord Strong Regionally restricted euxassay_008421_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_008421_13
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_13
TS23: liver Moderate Spotted euxassay_008421_13
TS23: midgut Moderate Regionally restricted euxassay_008421_13
TS23: thymus primordium Moderate Regionally restricted euxassay_008421_13
TS23: right lung Moderate Regionally restricted euxassay_008421_13
TS23: pleura Strong Regionally restricted euxassay_008421_13
TS23: peritoneum Moderate Regionally restricted euxassay_008421_13
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_13
Specimen euxassay_008421_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_14
TS23: spinal cord Strong Regionally restricted euxassay_008421_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_008421_14
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_14
TS23: liver Moderate Spotted euxassay_008421_14
TS23: midgut Strong Regionally restricted euxassay_008421_14
TS23: right lung Moderate Regionally restricted euxassay_008421_14
TS23: pleura Strong Regionally restricted euxassay_008421_14
TS23: peritoneum Moderate Regionally restricted euxassay_008421_14
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_14
Specimen euxassay_008421_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_15
TS23: spinal cord Strong Regionally restricted euxassay_008421_15
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_15
TS23: liver Moderate Spotted euxassay_008421_15
TS23: midgut Strong Regionally restricted euxassay_008421_15
TS23: thymus primordium Moderate Regionally restricted euxassay_008421_15
TS23: right lung Moderate Regionally restricted euxassay_008421_15
TS23: pleura Strong Regionally restricted euxassay_008421_15
TS23: peritoneum Moderate Regionally restricted euxassay_008421_15
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_15
Specimen euxassay_008421_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_16
TS23: spinal cord Strong Regionally restricted euxassay_008421_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_008421_16
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_16
TS23: liver Moderate Spotted euxassay_008421_16
TS23: midgut Strong Regionally restricted euxassay_008421_16
TS23: thymus primordium Moderate Regionally restricted euxassay_008421_16
TS23: right lung Moderate Regionally restricted euxassay_008421_16
TS23: pleura Strong Regionally restricted euxassay_008421_16
TS23: peritoneum Moderate Regionally restricted euxassay_008421_16
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_16
Specimen euxassay_008421_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_17
TS23: spinal cord Strong Regionally restricted euxassay_008421_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_008421_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_008421_17
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_17
TS23: liver Moderate Spotted euxassay_008421_17
TS23: midgut Strong Regionally restricted euxassay_008421_17
TS23: right lung Moderate Regionally restricted euxassay_008421_17
TS23: pleura Strong Regionally restricted euxassay_008421_17
TS23: peritoneum Moderate Regionally restricted euxassay_008421_17
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_17
Specimen euxassay_008421_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_008421_18
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_008421_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008421_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008421_18
TS23: vagus ganglion Strong Regionally restricted euxassay_008421_18
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_18
TS23: renal cortex Strong Regionally restricted euxassay_008421_18
TS23: liver Moderate Spotted euxassay_008421_18
TS23: midgut Strong Regionally restricted euxassay_008421_18
TS23: rib Strong Regionally restricted euxassay_008421_18
TS23: submandibular gland primordium Strong Regionally restricted euxassay_008421_18
TS23: right lung Moderate Regionally restricted euxassay_008421_18
TS23: pleura Strong Regionally restricted euxassay_008421_18
TS23: peritoneum Moderate Regionally restricted euxassay_008421_18
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_18
Specimen euxassay_008421_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_008421_19
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_008421_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008421_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_008421_19
TS23: facial ganglion Strong Regionally restricted euxassay_008421_19
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_19
TS23: renal cortex Strong Regionally restricted euxassay_008421_19
TS23: liver Moderate Spotted euxassay_008421_19
TS23: midgut Strong Regionally restricted euxassay_008421_19
TS23: rib Strong Regionally restricted euxassay_008421_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_008421_19
TS23: right lung Moderate Regionally restricted euxassay_008421_19
TS23: pleura Strong Regionally restricted euxassay_008421_19
TS23: peritoneum Moderate Regionally restricted euxassay_008421_19
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_19
Specimen euxassay_008421_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008421_20
TS23: facial ganglion Strong Regionally restricted euxassay_008421_20
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_20
TS23: renal cortex Strong Regionally restricted euxassay_008421_20
TS23: liver Moderate Spotted euxassay_008421_20
TS23: midgut Strong Regionally restricted euxassay_008421_20
TS23: rib Strong Regionally restricted euxassay_008421_20
TS23: right lung Moderate Regionally restricted euxassay_008421_20
TS23: pleura Strong Regionally restricted euxassay_008421_20
TS23: peritoneum Moderate Regionally restricted euxassay_008421_20
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_20
Specimen euxassay_008421_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_21
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008421_21
TS23: facial ganglion Strong Regionally restricted euxassay_008421_21
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_21
TS23: renal cortex Strong Regionally restricted euxassay_008421_21
TS23: liver Moderate Spotted euxassay_008421_21
TS23: rib Strong Regionally restricted euxassay_008421_21
TS23: right lung Moderate Regionally restricted euxassay_008421_21
TS23: pleura Strong Regionally restricted euxassay_008421_21
TS23: peritoneum Moderate Regionally restricted euxassay_008421_21
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_21
Specimen euxassay_008421_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_008421_22
TS23: trigeminal ganglion Strong Regionally restricted euxassay_008421_22
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_008421_22
TS23: liver Moderate Spotted euxassay_008421_22
TS23: rib Strong Regionally restricted euxassay_008421_22
TS23: right lung Moderate Regionally restricted euxassay_008421_22
TS23: pleura Strong Regionally restricted euxassay_008421_22
TS23: peritoneum Moderate Regionally restricted euxassay_008421_22
TS23: embryo mesenchyme Moderate Regionally restricted euxassay_008421_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory