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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822808
Gene symbol: 9530091C08Rik
Gene name: RIKEN cDNA 9530091C08 gene
Probe: T35787
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006470_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_03
Specimen euxassay_006470_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_04
Specimen euxassay_006470_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_05
TS23: pons mantle layer Strong Single cells euxassay_006470_05
TS23: pons ventricular layer Strong Single cells euxassay_006470_05
Specimen euxassay_006470_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_06
TS23: pons mantle layer Strong Single cells euxassay_006470_06
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_006470_06
TS23: midbrain mantle layer Strong Single cells euxassay_006470_06
TS23: adrenal medulla Weak Single cells euxassay_006470_06
Specimen euxassay_006470_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_07
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_006470_07
TS23: pons mantle layer Moderate Single cells euxassay_006470_07
TS23: midbrain mantle layer Strong Single cells euxassay_006470_07
TS23: dorsal grey horn Moderate Single cells euxassay_006470_07
TS23: adrenal medulla Weak Single cells euxassay_006470_07
Specimen euxassay_006470_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_08
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_006470_08
TS23: midbrain mantle layer Strong Single cells euxassay_006470_08
TS23: thalamus mantle layer Moderate Single cells euxassay_006470_08
TS23: dorsal grey horn Moderate Single cells euxassay_006470_08
Specimen euxassay_006470_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_09
TS23: midbrain mantle layer Weak Single cells euxassay_006470_09
TS23: thalamus mantle layer Moderate Single cells euxassay_006470_09
TS23: dorsal grey horn Weak Single cells euxassay_006470_09
Specimen euxassay_006470_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_10
TS23: midbrain mantle layer Moderate Single cells euxassay_006470_10
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_006470_10
Specimen euxassay_006470_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal grey horn Weak Single cells euxassay_006470_11
Specimen euxassay_006470_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal grey horn Weak Single cells euxassay_006470_12
Specimen euxassay_006470_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_13
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_006470_13
TS23: midbrain mantle layer Moderate Single cells euxassay_006470_13
TS23: dorsal grey horn Moderate Single cells euxassay_006470_13
TS23: adrenal medulla Weak Single cells euxassay_006470_13
Specimen euxassay_006470_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_14
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_006470_14
TS23: midbrain mantle layer Moderate Single cells euxassay_006470_14
TS23: dorsal grey horn Moderate Single cells euxassay_006470_14
TS23: adrenal medulla Weak Single cells euxassay_006470_14
Specimen euxassay_006470_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_15
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_006470_15
TS23: midbrain mantle layer Moderate Single cells euxassay_006470_15
TS23: thalamus mantle layer Strong Single cells euxassay_006470_15
Specimen euxassay_006470_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_16
TS23: pons ventricular layer Strong Single cells euxassay_006470_16
TS23: pons mantle layer Strong Single cells euxassay_006470_16
TS23: midbrain mantle layer Moderate Single cells euxassay_006470_16
TS23: thalamus mantle layer Moderate Single cells euxassay_006470_16
Specimen euxassay_006470_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_17
TS23: pons mantle layer Strong Single cells euxassay_006470_17
TS23: pons ventricular layer Strong Single cells euxassay_006470_17
TS23: midbrain mantle layer Moderate Single cells euxassay_006470_17
Specimen euxassay_006470_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_18
TS23: pons mantle layer Strong Single cells euxassay_006470_18
Specimen euxassay_006470_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_19
Specimen euxassay_006470_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_006470_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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01/06/2026
MGI 6.24 		The Jackson Laboratory