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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822744
Gene symbol: 4931406C07Rik
Gene name: RIKEN cDNA 4931406C07 gene
Probe: MGC clone 27581
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003185_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_01
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_01
TS23: neural retina Moderate Regionally restricted euxassay_003185_01
Specimen euxassay_003185_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_02
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_02
TS23: neural retina Moderate Regionally restricted euxassay_003185_02
Specimen euxassay_003185_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_03
TS23: neural retina Moderate Regionally restricted euxassay_003185_03
Specimen euxassay_003185_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_04
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_04
TS23: neural retina Moderate Regionally restricted euxassay_003185_04
Specimen euxassay_003185_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_05
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_05
TS23: hindbrain Moderate Uniform euxassay_003185_05
Specimen euxassay_003185_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_06
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_06
TS23: hindbrain Moderate Uniform euxassay_003185_06
TS23: midbrain Moderate Uniform euxassay_003185_06
Specimen euxassay_003185_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_07
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_07
TS23: hindbrain Moderate Uniform euxassay_003185_07
TS23: midbrain Moderate Uniform euxassay_003185_07
TS23: diencephalon Moderate Uniform euxassay_003185_07
Specimen euxassay_003185_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003185_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003185_08
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_08
TS23: midbrain Moderate Uniform euxassay_003185_08
TS23: hindbrain Moderate Uniform euxassay_003185_08
TS23: diencephalon Moderate Uniform euxassay_003185_08
Specimen euxassay_003185_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003185_09
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_09
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003185_09
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_09
TS23: midbrain Moderate Uniform euxassay_003185_09
TS23: hindbrain Moderate Uniform euxassay_003185_09
TS23: diencephalon Moderate Uniform euxassay_003185_09
Specimen euxassay_003185_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_10
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_10
TS23: midbrain Moderate Uniform euxassay_003185_10
TS23: hindbrain Moderate Uniform euxassay_003185_10
TS23: diencephalon Moderate Uniform euxassay_003185_10
Specimen euxassay_003185_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003185_11
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_11
TS23: midbrain Moderate Uniform euxassay_003185_11
TS23: hindbrain Moderate Uniform euxassay_003185_11
TS23: diencephalon Moderate Uniform euxassay_003185_11
TS23: spinal cord Moderate Uniform euxassay_003185_11
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003185_11
Specimen euxassay_003185_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003185_12
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_12
TS23: spinal cord Moderate Uniform euxassay_003185_12
TS23: midbrain Moderate Uniform euxassay_003185_12
TS23: hindbrain Moderate Uniform euxassay_003185_12
TS23: diencephalon Moderate Uniform euxassay_003185_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003185_12
Specimen euxassay_003185_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003185_13
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_13
TS23: spinal cord Moderate Uniform euxassay_003185_13
TS23: midbrain Moderate Uniform euxassay_003185_13
TS23: hindbrain Moderate Uniform euxassay_003185_13
TS23: diencephalon Moderate Uniform euxassay_003185_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003185_13
Specimen euxassay_003185_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003185_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_14
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_14
TS23: spinal cord Moderate Uniform euxassay_003185_14
TS23: midbrain Moderate Uniform euxassay_003185_14
TS23: hindbrain Moderate Uniform euxassay_003185_14
TS23: diencephalon Moderate Uniform euxassay_003185_14
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003185_14
Specimen euxassay_003185_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_15
TS23: spinal cord Moderate Uniform euxassay_003185_15
TS23: midbrain Moderate Uniform euxassay_003185_15
TS23: hindbrain Moderate Uniform euxassay_003185_15
TS23: diencephalon Moderate Uniform euxassay_003185_15
Specimen euxassay_003185_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003185_16
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_16
TS23: spinal cord Moderate Uniform euxassay_003185_16
TS23: midbrain Moderate Uniform euxassay_003185_16
TS23: hindbrain Moderate Uniform euxassay_003185_16
TS23: diencephalon Moderate Uniform euxassay_003185_16
TS23: nucleus pulposus Weak Regionally restricted euxassay_003185_16
Specimen euxassay_003185_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003185_17
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_17
TS23: spinal cord Moderate Uniform euxassay_003185_17
TS23: midbrain Moderate Uniform euxassay_003185_17
TS23: hindbrain Moderate Uniform euxassay_003185_17
TS23: diencephalon Moderate Uniform euxassay_003185_17
TS23: nucleus pulposus Weak Regionally restricted euxassay_003185_17
Specimen euxassay_003185_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003185_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_18
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_18
TS23: spinal cord Moderate Uniform euxassay_003185_18
TS23: midbrain Moderate Uniform euxassay_003185_18
TS23: hindbrain Moderate Uniform euxassay_003185_18
TS23: diencephalon Moderate Uniform euxassay_003185_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003185_18
Specimen euxassay_003185_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_19
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_003185_19
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_19
TS23: spinal cord Moderate Uniform euxassay_003185_19
TS23: midbrain Moderate Uniform euxassay_003185_19
TS23: hindbrain Moderate Uniform euxassay_003185_19
TS23: diencephalon Moderate Uniform euxassay_003185_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003185_19
Specimen euxassay_003185_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_003185_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_20
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_003185_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_20
TS23: midbrain Moderate Uniform euxassay_003185_20
TS23: hindbrain Moderate Uniform euxassay_003185_20
TS23: spinal cord Moderate Uniform euxassay_003185_20
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003185_20
Specimen euxassay_003185_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_21
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_21
TS23: hindbrain Moderate Uniform euxassay_003185_21
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_003185_21
Specimen euxassay_003185_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: facial ganglion Moderate Regionally restricted euxassay_003185_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_22
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_22
TS23: hindbrain Moderate Uniform euxassay_003185_22
Specimen euxassay_003185_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_23
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_003185_23
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_23
TS23: hindbrain Moderate Uniform euxassay_003185_23
Specimen euxassay_003185_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_003185_24
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_003185_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory