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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4822640
Gene symbol: Shisal1
Gene name: shisa like 1
Probe: T35014
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006325_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006325_01
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_01
Specimen euxassay_006325_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006325_02
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_02
Specimen euxassay_006325_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_03
TS23: neural retina Weak Regionally restricted euxassay_006325_03
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_03
Specimen euxassay_006325_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_04
TS23: facial ganglion Moderate Regionally restricted euxassay_006325_04
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_04
Specimen euxassay_006325_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_05
TS23: facial ganglion Moderate Regionally restricted euxassay_006325_05
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_05
Specimen euxassay_006325_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006325_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_06
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_06
TS23: midbrain mantle layer Weak Single cells euxassay_006325_06
Specimen euxassay_006325_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006325_07
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006325_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_07
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_07
TS23: midbrain mantle layer Weak Single cells euxassay_006325_07
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_006325_07
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006325_07
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006325_07
Specimen euxassay_006325_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006325_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_08
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_08
TS23: midbrain mantle layer Weak Single cells euxassay_006325_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_08
TS23: metencephalon lateral wall Weak Regionally restricted euxassay_006325_08
Specimen euxassay_006325_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_006325_09
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_09
TS23: midbrain mantle layer Weak Single cells euxassay_006325_09
TS23: metencephalon lateral wall Weak Regionally restricted euxassay_006325_09
Specimen euxassay_006325_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_006325_10
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_10
TS23: midbrain mantle layer Weak Single cells euxassay_006325_10
Specimen euxassay_006325_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006325_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_11
TS23: midbrain mantle layer Weak Single cells euxassay_006325_11
Specimen euxassay_006325_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_12
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006325_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_12
Specimen euxassay_006325_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_13
TS23: midbrain mantle layer Weak Single cells euxassay_006325_13
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006325_13
Specimen euxassay_006325_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_14
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006325_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_14
TS23: midbrain mantle layer Weak Single cells euxassay_006325_14
Specimen euxassay_006325_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_006325_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006325_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_15
TS23: midbrain mantle layer Weak Single cells euxassay_006325_15
TS23: medulla oblongata lateral wall Weak Regionally restricted euxassay_006325_15
Specimen euxassay_006325_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_006325_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006325_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_16
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_16
TS23: midbrain mantle layer Weak Single cells euxassay_006325_16
Specimen euxassay_006325_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_006325_17
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_006325_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006325_17
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_17
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_17
TS23: midbrain mantle layer Weak Single cells euxassay_006325_17
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006325_17
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006325_17
Specimen euxassay_006325_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_18
TS23: facial ganglion Moderate Regionally restricted euxassay_006325_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_006325_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_18
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_006325_18
TS23: midbrain mantle layer Weak Single cells euxassay_006325_18
TS23: medulla oblongata lateral wall Moderate Regionally restricted euxassay_006325_18
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006325_18
Specimen euxassay_006325_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_19
TS23: facial ganglion Moderate Regionally restricted euxassay_006325_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_006325_19
TS23: metencephalon lateral wall Moderate Regionally restricted euxassay_006325_19
Specimen euxassay_006325_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_20
TS23: facial ganglion Moderate Regionally restricted euxassay_006325_20
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_20
Specimen euxassay_006325_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_006325_21
TS23: facial ganglion Moderate Regionally restricted euxassay_006325_21
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_21
Specimen euxassay_006325_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_006325_22
Specimen euxassay_006325_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_006325_23
Specimen euxassay_006325_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Weak Regionally restricted euxassay_006325_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
10/22/2024
MGI 6.24 		The Jackson Laboratory