Gene Expression Data
Assay Details
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Assay
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Reference:
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J:158268
Hassan AS, et al., Expression of two novel transcripts in the mouse definitive endoderm. Gene Expr Patterns. 2010 Feb 12;10(2-3):127-34
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:4438446
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Gene symbol:
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D230030E09Rik
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Gene name:
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Riken cDNA D230030E09 gene
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Probe:
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Npe cDNA
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
4A:
embryonic day 7.5
(more  )
Note: This is an early bud stage embryo.
Specimen
4A:
(close  )
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Genetic Background:
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ICR
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Age:
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embryonic day 7.5
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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This is an early bud stage embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS10: embryo |
Present |
Regionally restricted |
4A
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Expression is present in the posterior notochord.
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| TS10: node |
Present |
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4A
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Specimen
4B:
embryonic day 7.75
(more )
Note: This is an early head fold stage embryo.
Specimen
4B:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 7.75
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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This is an early head fold stage embryo.
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Specimen
4C:
embryonic day 8.0
(more )
Note: This is a late head fold stage embryo.
Specimen
4C:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 8.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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This is a late head fold stage embryo.
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Specimen
4D:
embryonic day 8.0
(more )
Note: This is a late head fold stage embryo.
Specimen
4D:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 8.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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This is a late head fold stage embryo.
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Specimen
4E:
embryonic day 8.0
(more )
Note: This is a late head fold stage embryo. This is a section from embryo 4E.
Specimen
4E:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 8.0
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Age Note:
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Age assigned by curator based on morphological criteria supplied by authors.
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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This is a late head fold stage embryo. This is a section from embryo 4E.
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Specimen
4F:
embryonic day 8.0
(more )
Note: This is a zero somite stage embryo.
Specimen
4F:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 8.0
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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This is a zero somite stage embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS12: notochord |
Present |
Regionally restricted |
4F
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Expression is present in the posterior notochord.
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| TS12: node |
Present |
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4F
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Specimen
4G:
embryonic day 8.0
(more )
Note: This is a zero somite stage embryo.
Specimen
4G:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 8.0
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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This is a zero somite stage embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS12: notochord |
Present |
Regionally restricted |
4G
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Expression is present in the posterior notochord.
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| TS12: node |
Present |
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4G
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Specimen
4H:
embryonic day 8.0
(more )
Note: This is a zero somite stage embryo.
Specimen
4H:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 8.0
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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This is a zero somite stage embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS12: notochord |
Strong |
Regionally restricted |
4H
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There is symmetric expression in cells within the domain bordered by the node and extending into the posterior notochord.
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| TS12: node |
Present |
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4H
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Specimen
4I:
embryonic day 8.0
(more )
Note: This is a zero somite stage embryo.
Specimen
4I:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 8.0
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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This is a zero somite stage embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS12: notochord |
Present |
Regionally restricted |
4I
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There is symmetric expression in cells within the domain bordered by the node and extending into the posterior notochord.
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| TS12: node |
Present |
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4I
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Specimen
4J:
embryonic day 8.0
(more )
Note: This is a zero somite stage embryo.
Specimen
4J:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 8.0
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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This is a zero somite stage embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS12: notochord |
Present |
Regionally restricted |
4J
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There is symmetric expression in cells within the domain bordered by the node and extending into the posterior notochord.
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| TS12: node |
Present |
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4J
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Specimen
4K:
embryonic day 8.5
(more )
Note: This is a seven somite stage embryo.
Specimen
4K:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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This is a seven somite stage embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS12: embryo |
Present |
Regionally restricted |
4K
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Expression is present in the posterior.
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Specimen
5A:
embryonic day 8.5
(more )
Specimen
5A:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: hindgut diverticulum |
Present |
Regionally restricted |
5A
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Expression is present in the posterior-most hindgut.
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| TS13: notochord |
Present |
Regionally restricted |
5A
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Expression is present in the posterior-most notochord cells.
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Specimen
5B:
embryonic day 8.5
(more )
Note: This is a section from embryo 5A.
Specimen
5B:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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This is a section from embryo 5A.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: hindgut diverticulum |
Present |
Regionally restricted |
5B
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Expression is present in the posterior-most hindgut.
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Specimen
5C:
embryonic day 9.0
(more )
Specimen
5C:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 9.0
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS14: hindgut diverticulum |
Present |
Regionally restricted |
5C
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Expression is present in the posterior-most hindgut.
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| TS14: notochord |
Present |
Regionally restricted |
5C
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Expression is present in a poorly defined group of posterior-most notochord cells.
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Specimen
5D:
embryonic day 9.0
(more )
Note: This is a section from embryo 5C.
Specimen
5D:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 9.0
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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This is a section from embryo 5C.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS14: notochord |
Present |
Regionally restricted |
5D
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Expression is present in a poorly defined group of posterior-most notochord cells.
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| TS14: hindgut diverticulum |
Present |
Regionally restricted |
5D
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Expression is present in the dorsal aspect of the hindgut.
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Specimen
5E:
embryonic day 9.0
(more )
Note: This is a section from embryo 5C.
Specimen
5E:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 9.0
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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This is a section from embryo 5C.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS14: hindgut diverticulum |
Present |
Regionally restricted |
5E
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Expression is present in the dorsal aspect of the hindgut.
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| TS14: notochord |
Present |
Regionally restricted |
5E
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Expression is present in a poorly defined group of posterior-most notochord cells.
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Specimen
5F:
embryonic day 9.5
(more )
Specimen
5F:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 9.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS15: hindgut |
Present |
Regionally restricted |
5F
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Expression is present in the posterior-most hindgut.
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| TS15: notochord |
Present |
Regionally restricted |
5F
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Expression is present in a poorly defined group of posterior-most notochord cells.
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Specimen
5G:
embryonic day 10.5
(more )
Specimen
5G:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 10.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: hindgut |
Present |
Regionally restricted |
5G
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Expression is present in the tip of the posterior-most hindgut.
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| TS17: notochord |
Present |
Regionally restricted |
5G
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Expression is present in a poorly defined group of posterior-most notochord cells.
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Specimen
6I:
embryonic day 7.5
(more )
Specimen
6I:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 7.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: notochordal process |
Present |
Regionally restricted |
6I
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Expression is restricted to the central cells of posterior notochord.
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Specimen
6J:
embryonic day 7.5
(more )
Specimen
6J:
(close )
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Genetic Background:
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ICR
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Age:
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embryonic day 7.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: notochordal process |
Present |
Regionally restricted |
6J
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Expression is restricted to the central cells of posterior notochord.
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