Gene Expression Data
Assay Details
Assay
|
Reference:
|
J:158268
Hassan AS, et al., Expression of two novel transcripts in the mouse definitive endoderm. Gene Expr Patterns. 2010 Feb 12;10(2-3):127-34
|
Assay type:
|
RNA in situ
|
MGI Accession ID:
|
MGI:4438440
|
Gene symbol:
|
Apela
|
Gene name:
|
apelin receptor early endogenous ligand
|
Probe:
|
Ende cDNA
|
Probe preparation:
|
Antisense labelled with digoxigenin RNA
|
Visualized with:
|
Alkaline phosphatase
|
|
Results
|
Specimen
2A:
embryonic day 7.25
(more )
Note: This is a late streak stage embryo.
Specimen
2A:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.25
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
This is a late streak stage embryo.
|
Specimen
2B:
embryonic day 7.25
(more )
Note: This is a late streak stage embryo.
Specimen
2B:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.25
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
This is a late streak stage embryo.
|
Specimen
2C:
embryonic day 7.25
(more )
Note: This is a late streak stage embryo. This is a section from embryo 2B.
Specimen
2C:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.25
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is a late streak stage embryo. This is a section from embryo 2B.
|
Specimen
2D:
embryonic day 7.5
(more )
Note: This is an early bud stage embryo.
Specimen
2D:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.5
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
This is an early bud stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS10: embryo |
Present |
Regionally restricted |
2D
|
Expression is present in the distal epiblast.
|
Specimen
2E:
embryonic day 7.5
(more )
Note: This is an early bud stage embryo.
Specimen
2E:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.5
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
This is an early bud stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS10: embryo |
Present |
Regionally restricted |
2E
|
Expression is present in the distal epiblast.
|
Specimen
2F:
embryonic day 7.5
(more )
Note: This is an early bud stage embryo. This is a section from embryo 2E
Specimen
2F:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.5
|
Age Note:
|
Age assigned by curator based on morphological criteria supplied by authors.
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is an early bud stage embryo. This is a section from embryo 2E
|
Structure |
Level |
Pattern |
Image |
Note |
TS10: embryo |
Present |
Regionally restricted |
2F
|
Expression is present in the distal epiblast.
|
Specimen
2G:
embryonic day 7.75
(more )
Note: This is an early head fold stage embryo.
Specimen
2G:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.75
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
This is an early head fold stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: definitive endoderm |
Present |
Regionally restricted |
2G
|
Expression is present in the anterior-most definitive endoderm.
|
Specimen
2H:
embryonic day 7.75
(more )
Note: This is an early head fold stage embryo.
Specimen
2H:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.75
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
This is an early head fold stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: definitive endoderm |
Present |
Regionally restricted |
2H
|
Expression is present in the anterior-most definitive endoderm.
|
Specimen
2I:
embryonic day 7.75
(more )
Note: This is an early head fold stage embryo. This is a section from embryo 2G.
Specimen
2I:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.75
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is an early head fold stage embryo. This is a section from embryo 2G.
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: embryo ectoderm |
Present |
Regionally restricted |
2I
|
Expression is present in the midline ectoderm in the distal tip of the embryo.
|
Specimen
2J:
embryonic day 7.75
(more )
Note: This is an early head fold stage embryo.
Specimen
2J:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.75
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
This is an early head fold stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: definitive endoderm |
Present |
Regionally restricted |
2J
|
Expression is present in the anterior-most definitive endoderm; as development progresses this expression then spreads along the proximal half of the embryo to the lateral and posterior definitive endoderm.
|
Specimen
2K:
embryonic day 7.75
(more )
Note: This is an early head fold stage embryo.
Specimen
2K:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.75
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
This is an early head fold stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: definitive endoderm |
Present |
Regionally restricted |
2K
|
Expression is present in the anterior-most definitive endoderm; as development progresses this expression then spreads along the proximal half of the embryo to the lateral and posterior definitive endoderm.
|
TS11: embryo ectoderm |
Present |
Regionally restricted |
2K
|
Expression is present in the midline ectoderm in the distal tip of the embryo.
|
Specimen
2L:
embryonic day 7.75
(more )
Note: This is an early head fold stage embryo. This is a section from embryo 2J.
Specimen
2L:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.75
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is an early head fold stage embryo. This is a section from embryo 2J.
|
Specimen
2M:
embryonic day 7.75
(more )
Note: This is an early head fold stage embryo. This is a section from embryo 2J.
Specimen
2M:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.75
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is an early head fold stage embryo. This is a section from embryo 2J.
|
Specimen
2N:
embryonic day 7.75
(more )
Note: This is an early head fold stage embryo. This is a section from embryo 2J.
Specimen
2N:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.75
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is an early head fold stage embryo. This is a section from embryo 2J.
|
Specimen
2O:
embryonic day 7.75
(more )
Note: This is an early head fold stage embryo. This is a section from embryo 2J.
Specimen
2O:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 7.75
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is an early head fold stage embryo. This is a section from embryo 2J.
|
Specimen
3A:
embryonic day 8.25
(more )
Specimen
3A:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
3B:
embryonic day 8.25
(more )
Specimen
3B:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
3C:
embryonic day 8.25
(more )
Specimen
3C:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: foregut diverticulum |
Present |
Regionally restricted |
3C inset
,
3C
|
Expression is present in the distal part of the midline ectoderm and symmetrically expressed in the node region of the embryo.
|
Specimen
3D:
embryonic day 8.25
(more )
Note: This is a section from embryo 3A.
Specimen
3D:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is a section from embryo 3A.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: foregut diverticulum |
Present |
|
3D
,
3H
|
Expression is enriched in the ventral foregut lip and the ventral part of the foregut invagination.
|
TS12: embryo ectoderm |
Present |
Regionally restricted |
3D
,
3H
|
Expression is present in the distal part of the midline ectoderm. It is absent from the dorsal midline and flanking cells of the developing foregut.
|
Specimen
3E:
embryonic day 8.25
(more )
Note: This is a section from embryo 3A.
Specimen
3E:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 8.25
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is a section from embryo 3A.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: foregut diverticulum |
Present |
|
3I
,
3E
|
Expression is enriched in the ventral foregut lip and the ventral part of the foregut invagination.
|
TS12: embryo ectoderm |
Present |
Regionally restricted |
3I
,
3E
|
Expression is present in the distal part of the midline ectoderm. It is absent from the dorsal midline and flanking cells of the developing foregut.
|
Specimen
3F:
embryonic day 8.5
(more )
Note: This is an 8-10 somite stage embryo.
Specimen
3F:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Note:
|
This is an 8-10 somite stage embryo.
|
Specimen
3G:
embryonic day 8.5
(more )
Note: This is an 8-10 somite stage embryo. This is a section from embryo 3F.
Specimen
3G:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is an 8-10 somite stage embryo. This is a section from embryo 3F.
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: foregut diverticulum |
Present |
Regionally restricted |
3G
|
Expression is specific to the ventral aspect of the foregut and absent in the remainder (dorsal and lateral aspects) of the foregut.
|
Specimen
3J:
embryonic day 8.5
(more )
Note: This is an 8-10 somite stage embryo. This is a section from embryo 3F.
Specimen
3J:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is an 8-10 somite stage embryo. This is a section from embryo 3F.
|
Specimen
3K:
embryonic day 8.75
(more )
Specimen
3K:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 8.75
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
3L:
embryonic day 9.0
(more )
Specimen
3L:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 9.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
3M:
embryonic day 9.25
(more )
Specimen
3M:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 9.25
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: neural tube |
Present |
Regionally restricted |
3M
|
Expression is present in the posterior region.
|
Specimen
3N:
embryonic day 9.5
(more )
Specimen
3N:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: embryo |
Present |
|
3N
|
|
TS15: neural tube |
Present |
Regionally restricted |
3N
|
Expression is present in the ventral portion of the neural tube in the posterior end of the embryo.
|
Specimen
3O:
embryonic day 9.75
(more )
Specimen
3O:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 9.75
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: neural tube |
Present |
Regionally restricted |
3O
|
Expression is present in the ventral portion of the neural tube in the posterior end of the embryo.
|
Specimen
3P:
embryonic day 10.0
(more )
Specimen
3P:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: foregut |
Present |
Regionally restricted |
3P
|
Expression is present in a region overlying the heart and absent elsewhere in the foregut.
|
TS16: neural tube |
Present |
Regionally restricted |
3P
|
Expression is present in the ventral portion of the neural tube in the posterior end of the embryo.
|
Specimen
3Q:
embryonic day 10.0
(more )
Note: This is a section from embryo 3P.
Specimen
3Q:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is a section from embryo 3P.
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: foregut |
Present |
Regionally restricted |
3Q
|
Expression is present in a region overlying the heart and absent elsewhere in the foregut.
|
TS16: neural tube |
Present |
Regionally restricted |
3Q
|
Expression is present in the ventral portion of the neural tube in the posterior end of the embryo.
|
Specimen
3R:
embryonic day 10.0
(more )
Note: This is a section from embryo 3P.
Specimen
3R:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is a section from embryo 3P.
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: neural tube |
Present |
Regionally restricted |
3R
|
Expression is restricted to the ventral half of the neural tube.
|
TS16: foregut |
Present |
Regionally restricted |
3R
|
Expression is present in a region overlying the heart and absent elsewhere in the foregut.
|
Specimen
3S:
embryonic day 10.0
(more )
Note: This is a section from embryo 3P.
Specimen
3S:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 10.0
|
Sex:
|
Not Specified
|
Type:
|
section from whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Cryosection
|
Note:
|
This is a section from embryo 3P.
|
Structure |
Level |
Pattern |
Image |
Note |
TS16: neural tube |
Present |
Regionally restricted |
3S
|
Expression is restricted to the ventral half of the neural tube.
|
TS16: foregut |
Present |
Regionally restricted |
3S
|
Expression is present in a region overlying the heart and absent elsewhere in the foregut.
|
Specimen
3T:
embryonic day 10.25
(more )
Specimen
3T:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 10.25
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: foregut |
Present |
|
3T
|
Expression levels are reduced from those seen earlier.
|
TS17: hindgut |
Present |
|
3T
|
Expression levels are reduced from those seen earlier.
|
TS17: neural tube |
Present |
|
3T
|
Expression levels are reduced from those seen earlier.
|
Specimen
6E:
embryonic day 8.5
(more )
Specimen
6E:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
6F:
embryonic day 9.0-9.5
(more )
Specimen
6F:
(close )
Genetic Background:
|
ICR
|
Age:
|
embryonic day 9.0-9.5
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Fixation:
|
4% Paraformaldehyde
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: foregut-midgut junction |
Present |
Regionally restricted |
6F
|
Expression is present in the liver bud and foregut-midgut junction but is absent from the pancreatic buds.
|
|