Gene Expression Data
Assay Details
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Assay
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Reference:
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J:1461
Simeone A, et al., Two vertebrate homeobox genes related to the Drosophila empty spiracles gene are expressed in the embryonic cerebral cortex. EMBO J. 1992 Jul;11(7):2541-50
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|
Assay type:
|
RNA in situ
|
|
MGI Accession ID:
|
MGI:3766956
|
|
Gene symbol:
|
Emx2
|
|
Gene name:
|
empty spiracles homeobox 2
|
|
Probe:
|
Emx2 cDNA
|
|
Probe preparation:
|
Antisense labelled with S35 RNA
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|
Visualized with:
|
Autoradiography
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|
|
Results
|
Specimen
2f:
embryonic day 12.5
(more )
Specimen
2f:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: cerebral cortex |
Present |
|
2f
|
Expression in presumptive cortex.
|
| TS20: telencephalon |
Present |
Regionally restricted |
2f
|
Much stronger expression in posterior dorsal telencephalon, with a sharp posterior boundary and decreasingly intensity in progressively more anterior regions.
|
| TS20: head |
Present |
Regionally restricted |
2f
|
Expression in ectodermal regions in the snout.
|
| TS20: reproductive system |
Present |
Regionally restricted |
2f
|
Expression in the genital ridge.
|
Specimen
2g:
embryonic day 12.5
(more )
Specimen
2g:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: cerebral cortex |
Present |
|
2g
|
Expression in presumptive cortex.
|
| TS20: telencephalon |
Present |
Regionally restricted |
2g
|
Much stronger expression in posterior dorsal telencephalon, with a sharp posterior boundary and decreasingly intensity in progressively more anterior regions.
|
| TS20: midbrain |
Present |
Regionally restricted |
2g
|
Expression in limited mesencephalic areas.
|
| TS20: nasal cavity epithelium |
Present |
|
2g
|
|
| TS20: head |
Present |
Regionally restricted |
2g
|
Expression in ectodermal regions in the snout.
|
| TS20: reproductive system |
Present |
Regionally restricted |
2g
|
Expression in the genital ridge.
|
Specimen
2h:
embryonic day 12.5
(more )
Specimen
2h:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: cerebral cortex |
Present |
|
2h
|
Expression in presumptive cortex.
|
| TS20: telencephalon |
Present |
Regionally restricted |
2h
|
Much stronger expression in posterior dorsal telencephalon, with a sharp posterior boundary and decreasingly intensity in progressively more anterior regions.
|
| TS20: diencephalon |
Present |
Regionally restricted |
2h
|
Expression domain in the head appears to be extended to specific diencephalic regions.
|
| TS20: thalamus |
Present |
Regionally restricted |
2h
|
Diffuse expression in the ventral thalamus.
|
| TS20: midbrain |
Present |
Regionally restricted |
2h
|
Expression in limited mesencephalic areas.
|
| TS20: nasal cavity epithelium |
Present |
|
2h
|
|
| TS20: head |
Present |
Regionally restricted |
2h
|
Expression in ectodermal regions in the snout.
|
| TS20: metanephros |
Present |
Regionally restricted |
2h
|
Expression in metanephric tubular epithelia.
|
| TS20: reproductive system |
Present |
Regionally restricted |
2h
|
Expression in the genital ridge.
|
Specimen
2i:
embryonic day 12.5
(more )
Specimen
2i:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: cerebral cortex |
Present |
|
2i
|
Expression in presumptive cortex.
|
| TS20: telencephalon |
Present |
Regionally restricted |
2i
|
Much stronger expression in posterior dorsal telencephalon, with a sharp posterior boundary and decreasingly intensity in progressively more anterior regions. Expression in the olfactory bulbs.
|
| TS20: diencephalon |
Present |
Regionally restricted |
2i
|
Expression domain in the head appears to be extended to specific diencephalic regions.
|
| TS20: thalamus |
Present |
Regionally restricted |
2i
|
Diffuse expression in the ventral thalamus.
|
| TS20: midbrain |
Present |
Regionally restricted |
2i
|
Expression in limited mesencephalic areas.
|
| TS20: nasal cavity epithelium |
Present |
|
2i
|
|
| TS20: head |
Present |
Regionally restricted |
2i
|
Expression in ectodermal regions in the snout.
|
| TS20: metanephros |
Present |
Regionally restricted |
2i
|
Expression in metanephric tubular epithelia.
|
Specimen
2j:
embryonic day 12.5
(more )
Specimen
2j:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: cerebral cortex |
Present |
|
2j
|
Expression in presumptive cortex.
|
| TS20: telencephalon |
Present |
Regionally restricted |
2j
|
Much stronger expression in posterior dorsal telencephalon, with a sharp posterior boundary and decreasingly intensity in progressively more anterior regions.
|
| TS20: diencephalon |
Present |
Regionally restricted |
2j
|
Expression domain in the head appears to be extended to specific diencephalic regions.
|
| TS20: thalamus |
Present |
Regionally restricted |
2j
|
Diffuse expression in the ventral thalamus.
|
| TS20: midbrain |
Present |
Regionally restricted |
2j
|
Expression in limited mesencephalic areas.
|
| TS20: head |
Present |
Regionally restricted |
2j
|
vExpression in ectodermal regions in the snout.
|
Specimen
2l:
embryonic day 12.5
(more )
Specimen
2l:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: cerebral cortex |
Present |
Regionally restricted |
2l
|
Expression is not uniformly distributed across the cortical layers
|
| TS20: cerebral cortex mantle layer |
Trace |
|
2l
|
Almost undetectable within the external mantle layer.
|
| TS20: telencephalon |
Present |
Regionally restricted |
2l
|
No expression detectable in the internal basal telencephalic regions.
|
Specimen
2m:
embryonic day 12.5
(more )
Specimen
2m:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
2p:
embryonic day 13.5
(more )
Specimen
2p:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 13.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS21: nasal cavity |
Present |
|
2p
|
|
| TS21: diencephalon |
Present |
Regionally restricted |
2p
|
Expression in mammillary recess
|
| TS21: head |
Present |
Regionally restricted |
2p
|
Expression in ectodermal regions in the snout and limbs.
|
| TS21: limb |
Present |
Regionally restricted |
2p
|
Expression in ectodermal regions in the snout and limbs.
|
Specimen
2q:
embryonic day 13.5
(more )
Specimen
2q:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 13.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS21: cerebral cortex |
Present |
Regionally restricted |
2q
|
Uneven localization of expression across the cortical layers.
|
| TS21: diencephalon |
Present |
Regionally restricted |
2q
|
Localized expression in the diencephalon. Expression in mammillary recess.
|
| TS21: renal tubule |
Present |
Regionally restricted |
2q
|
Expression in metanephric tubular epithelia.
|
Specimen
3e:
embryonic day 12.5
(more )
Specimen
3e:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: head |
Present |
Regionally restricted |
3e
|
Diverse expression in the head.
|
| TS20: midbrain |
Present |
Regionally restricted |
3e
|
Localized expression in mesencephalic areas.
|
Specimen
3f:
embryonic day 12.5
(more )
Specimen
3f:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: head |
Present |
Regionally restricted |
3f
|
Diverse expression in the head.
|
| TS20: midbrain |
Present |
Regionally restricted |
3f
|
Localized expression in mesencephalic areas. Possible expression in interpeduncular areas.
|
Specimen
3g:
embryonic day 12.5
(more )
Specimen
3g:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: diencephalon |
Present |
Regionally restricted |
3g
|
Expression intensity in the diencephalon varies with the anteroposterior level of the section.
|
| TS20: thalamus |
Present |
Regionally restricted |
3g
|
Thalamic expression is strong in a limited region of the ventral portion of the dorsal thalamus.
|
| TS20: hypothalamus |
Present |
Regionally restricted |
3g
|
Expression in hypothalamic regions just posterior to the localization of Rathke's pouch.
|
| TS20: head |
Present |
Regionally restricted |
3g
|
Authors report expression in branchial arches in the first, mandibular, arch
|
Specimen
3h:
embryonic day 12.5
(more )
Specimen
3h:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: diencephalon |
Present |
Regionally restricted |
3h
|
Expression intensity in the diencephalon varies with the anteroposterior level of the section.
|
| TS20: thalamus |
Present |
Regionally restricted |
3h
|
Thalamic expression is strong in a limited region of the ventral portion of the dorsal thalamus.
|
| TS20: epithalamus |
Present |
|
3h
|
|
| TS20: head |
Present |
Regionally restricted |
3h
|
Authors report expression in branchial arches in the first, mandibular, arch.
|
Specimen
3i:
embryonic day 12.5
(more )
Specimen
3i:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: diencephalon |
Present |
Regionally restricted |
3i
|
Expression intensity in the diencephalon varies with the anteroposterior level of the section.
|
| TS20: thalamus |
Present |
Regionally restricted |
3i
|
Thalamic expression is strong in a limited region of the ventral portion of the dorsal thalamus.
|
| TS20: head |
Present |
Regionally restricted |
3i
|
Authors report expression in branchial arches in the first, mandibular, arch.
|
Specimen
3j:
embryonic day 12.5
(more )
Specimen
3j:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: cerebral cortex |
Present |
Regionally restricted |
3j
|
Expression in dorsal and posterior basal cortical regions.
|
Specimen
3k:
embryonic day 12.5
(more )
Specimen
3k:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: cerebral cortex |
Present |
Regionally restricted |
3k
|
Expression in dorsal and posterior basal cortical regions.
|
Specimen
3l:
embryonic day 12.5
(more )
Specimen
3l:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS20: cerebral cortex |
Present |
Regionally restricted |
3l
|
Expression in dorsal and posterior basal cortical regions.
|
Specimen
3p:
embryonic day 12.5
(more )
Specimen
3p:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
3q:
embryonic day 12.5
(more )
Specimen
3q:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
3r:
embryonic day 12.5
(more )
Specimen
3r:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 12.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
4c:
embryonic day 8.5
(more )
Note: 8 somites.
Specimen
4c:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 8.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
8 somites.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS13: neural ectoderm |
Present |
Regionally restricted |
4c
|
Expression in anterior dorsal neurectodermal regions.
|
Specimen
4d:
embryonic day 9.0
(more )
Note: 15 somites.
Specimen
4d:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 9.0
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
15 somites.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS14: central nervous system |
Present |
Regionally restricted |
4d
|
Authors report stronger expression in dorsal neurectoderm.
|
Specimen
4e:
embryonic day 9.5
(more )
Note: 22-23 somites.
Specimen
4e:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 9.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
22-23 somites.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS15: central nervous system |
Present |
Regionally restricted |
4e
|
Clear antero-posterior delimination of expression in dorsal neurectoderm.
|
Specimen
4f:
embryonic day 9.75
(more )
Note: 27 somites.
Specimen
4f:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 9.75
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
|
Note:
|
27 somites.
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS16: future forebrain |
Present |
Regionally restricted |
4f
|
Clear antero-posterior delimination of expression in dorsal neurectoderm, with a posterior boundary well within the roof of the presumptive diencephalon.
|
| TS16: diencephalon |
Present |
Regionally restricted |
4f
|
Ventral expression in the floor of the presumptive diencephalon.
|
| TS16: future midbrain |
Absent |
|
4f
|
|
| TS16: surface ectoderm |
Present |
Regionally restricted |
4f
|
Anterior ectodermal localization of expression, in a continuous region probably including the olfactory placodes.
|
| TS16: genitourinary system |
Present |
Regionally restricted |
4f
|
Expression in coelomic epithelium covering the mesonephric column, as well as the final part of the mesenteric attachment, fated to contribute to the genital ridge.
|
Specimen
not shown:
embryonic day 15.0
(more )
Specimen
not shown:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 15.0
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS23: embryo |
Present |
Single cells |
|
Authors report expression patterns identical to that seen in E13.5 embryos.
|
Specimen
5f:
embryonic day 17.0
(more )
Specimen
5f:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 17.0
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
5g:
embryonic day 17.0
(more )
Specimen
5g:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 17.0
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS25: head |
Present |
Regionally restricted |
5g
|
Authors state that expression reproduces that of Emx1.
|
Specimen
5h:
embryonic day 17.0
(more )
Specimen
5h:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 17.0
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS25: head |
Present |
Regionally restricted |
5h
|
Authors state that expression reproduces that of Emx1.
|
Specimen
5i:
embryonic day 17.0
(more )
Specimen
5i:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 17.0
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS25: head |
Present |
Regionally restricted |
5i
|
Authors state that expression reproduces that of Emx1.
|
Specimen
5j:
embryonic day 17.0
(more )
Specimen
5j:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 17.0
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS25: head |
Present |
Regionally restricted |
5j
|
Authors state that expression reproduces that of Emx1.
|
| TS25: hypothalamus |
Present |
Regionally restricted |
5j
|
Expression in posterior hypothalamic germinal areas.
|
Specimen
5l:
embryonic day 17.0
(more )
Specimen
5l:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 17.0
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS25: head |
Present |
Regionally restricted |
5l
|
Authors state that expression reproduces that of Emx1.
|
Specimen
5m:
embryonic day 13.5
(more )
Specimen
5m:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 13.5
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
Specimen
5n:
embryonic day 17.0
(more )
Specimen
5n:
(close )
|
Genetic Background:
|
C57BL/6
|
|
Age:
|
embryonic day 17.0
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
4% Paraformaldehyde
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS25: head |
Present |
Regionally restricted |
5n
|
Authors state that expression reproduces that of Emx1.
|
|