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Gene Expression Data
Assay Details
Assay
Reference: J:103446 McKee AE, et al., A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. BMC Dev Biol. 2005 Jul 20;5:14
Assay type: RNA in situ
MGI Accession ID: MGI:3617442
Gene symbol: Ptbp1
Gene name: polypyrimidine tract binding protein 1
Probe: Ptbp1 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen Additional File 5I: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: brain ventricular layer Present Additonal File 5I

Specimen Additional File 5J: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: lateral ventricle Present Regionally restricted Additonal File 5J Expression was detected in the subventricular area.

Specimen Additional File 5K: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: cerebellum external granule cell layer Present Additonal File 5K

Specimen Additional File 5L: postnatal day 0 (more )
Structure Level Pattern Image Note
TS27: tooth Present Additonal File 5L

Specimen E13.5: embryonic day 13.5 (more )
Note: Results for this specimen were listed in Additional File 3, row Ptbp1. Authors indicate that there was restricted expression in the nervous system with distinguishable expression in non-neural tissue.
Structure Level Pattern Image Note
TS21: cerebral cortex Present R0791-11 , R0791-13 , R0791-12 Expression was detected in precortical tissue.
TS21: brain ventricular layer Present R0791-11 , R0791-13 , R0791-12
TS21: olfactory epithelium Present R0791-11 , R0791-13 , R0791-12
TS21: retina Present R0791-11 , R0791-13 , R0791-12
TS21: spinal cord Present R0791-11 , R0791-13 , R0791-12
TS21: central nervous system ganglion Ambiguous R0791-12 , R0791-11 , R0791-13 Authors indicate that there was either ubiquitous or background expression.
TS21: corpus striatum Ambiguous R0791-12 , R0791-11 , R0791-13 Authors indicate that there was either ubiquitous or background expression.
TS21: hindbrain Ambiguous R0791-12 , R0791-11 , R0791-13 Authors indicate that there was either ubiquitous or background expression.

Specimen P0: postnatal day 0 (more )
Note: Results for this specimen were listed in Additional File 3, row Ptbp1. Authors indicate that there was restricted expression in the nervous system with distinguishable expression in non-neural tissue.
Structure Level Pattern Image Note
TS27: cerebral cortex Present R0791-21 , R0791-22
TS27: hippocampus Present R0791-21 , R0791-22
TS27: main olfactory bulb Present R0791-21 , R0791-22
TS27: retina Present R0791-21 , R0791-22
TS27: thymus Present R0791-21 , R0791-22
TS27: tooth Present R0791-21 , R0791-22
TS27: olfactory epithelium Ambiguous R0791-22 , R0791-21 Authors indicate that there was either ubiquitous or background expression.
TS27: corpus striatum Absent R0791-21 , R0791-22
TS27: hindbrain Absent R0791-21 , R0791-22
TS27: hypothalamus Absent R0791-21 , R0791-22
TS27: midbrain Absent R0791-21 , R0791-22
TS27: spinal cord Absent R0791-21 , R0791-22
TS27: thalamus Absent R0791-21 , R0791-22
TS27: trigeminal ganglion Absent R0791-21 , R0791-22


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory