Gene Expression Data
Assay Details
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Assay
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Reference:
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J:103446
McKee AE, et al., A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. BMC Dev Biol. 2005 Jul 20;5:14
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:3617425
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Gene symbol:
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Nxt1
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Gene name:
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NTF2-related export protein 1
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Probe:
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Nxt1 cDNA1
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
1A:
embryonic day 13.5
(more  )
Specimen
1A:
(close  )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 13.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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| Structure |
Level |
Pattern |
Image |
Note |
| TS21: telencephalon ventricular layer |
Present |
Regionally restricted |
1A
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Expression was detected in mitotically-active cells in the neuroepithelia of the developing telencephalon
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| TS21: 3rd ventricle |
Present |
Regionally restricted |
1A
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Expression was detected in the periventricular area.
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| TS21: 4th ventricle |
Present |
Regionally restricted |
1A
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Expression was detected in the periventricular area.
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Specimen
E13.5:
embryonic day 13.5
(more )
Note: Results for this specimen were listed in Additional File 3, row Nxt1. Authors indicate that there was restricted expression in the nervous system with distinguishable expression in non-neural tissue.
Specimen
E13.5:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 13.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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Results for this specimen were listed in Additional File 3, row Nxt1. Authors indicate that there was restricted expression in the nervous system with distinguishable expression in non-neural tissue.
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Specimen
P0:
postnatal day 0
(more )
Note: Results for this specimen were listed in Additional File 3, row Nxt1. Authors indicate that there was restricted expression in the nervous system with distinguishable expression in non-neural tissue.
Specimen
P0:
(close )
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Genetic Background:
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Not Specified
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Age:
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postnatal day 0
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Cryosection
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Note:
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Results for this specimen were listed in Additional File 3, row Nxt1. Authors indicate that there was restricted expression in the nervous system with distinguishable expression in non-neural tissue.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS27: cerebral cortex |
Present |
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R3822-22
,
R3822-21
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| TS27: corpus striatum |
Present |
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R3822-22
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R3822-21
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| TS27: hippocampus |
Present |
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R3822-22
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R3822-21
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| TS27: hypothalamus |
Present |
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R3822-22
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R3822-21
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| TS27: main olfactory bulb |
Present |
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R3822-22
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R3822-21
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| TS27: midbrain |
Present |
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R3822-22
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R3822-21
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| TS27: retina |
Present |
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R3822-22
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R3822-21
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| TS27: thalamus |
Present |
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R3822-22
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R3822-21
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| TS27: hindbrain |
Ambiguous |
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R3822-22
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R3822-21
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Authors indicate that there was either ubiquitous or background expression.
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| TS27: olfactory epithelium |
Ambiguous |
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R3822-22
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R3822-21
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Authors indicate that there was either ubiquitous or background expression.
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| TS27: spinal cord |
Ambiguous |
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R3822-22
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R3822-21
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Authors indicate that there was either ubiquitous or background expression.
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| TS27: trigeminal ganglion |
Ambiguous |
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R3822-22
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R3822-21
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Authors indicate that there was either ubiquitous or background expression.
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Analysis Tools