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Gene Expression Data
Assay Details
Assay
Reference: J:103446 McKee AE, et al., A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. BMC Dev Biol. 2005 Jul 20;5:14
Assay type: RNA in situ
MGI Accession ID: MGI:3617165
Gene symbol: Lsm3
Gene name: LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
Probe: Lsm3 cDNA1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: The results of this assay were listed in Additional File 3, row Lsm3.
Results
Specimen E13.5: embryonic day 13.5 (more )
Note: Authors indicate that there was either ubiquitous expression that is difficult to distinguish from background, or no expression. The authors observed uneven signals in different brain regions and annotated some structures as "Present".
Structure Level Pattern Image Note
TS21: central nervous system ganglion Present R4002-11
TS21: cerebral cortex Ambiguous R4002-11 Authors indicate that there was either ubiquitous or background expression in precortical tissue.
TS21: brain ventricular layer Ambiguous R4002-11 Authors indicate that there was either ubiquitous or background expression.
TS21: corpus striatum Ambiguous R4002-11 Authors indicate that there was either ubiquitous or background expression.
TS21: hindbrain Ambiguous R4002-11 Authors indicate that there was either ubiquitous or background expression.
TS21: olfactory epithelium Ambiguous R4002-11 Authors indicate that there was either ubiquitous or background expression.
TS21: retina Ambiguous R4002-11 Authors indicate that there was either ubiquitous or background expression.
TS21: spinal cord Ambiguous R4002-11 Authors indicate that there was either ubiquitous or background expression.
Specimen P0: postnatal day 0 (more )
Note: Authors indicate that there was either ubiquitous expression that is difficult to distinguish from background, or no expression. The authors observed uneven signals in different brain regions and annotated some structures as "Present".
Structure Level Pattern Image Note
TS27: cerebral cortex Ambiguous R4002-21 , R4002-22 Authors indicate that there was either ubiquitous or background expression.
TS27: hippocampus Ambiguous R4002-21 , R4002-22 Authors indicate that there was either ubiquitous or background expression.
TS27: corpus striatum Absent R4002-21 , R4002-22
TS27: hindbrain Absent R4002-21 , R4002-22
TS27: hypothalamus Absent R4002-21 , R4002-22
TS27: main olfactory bulb Absent R4002-21 , R4002-22
TS27: midbrain Absent R4002-21 , R4002-22
TS27: olfactory epithelium Absent R4002-21 , R4002-22
TS27: retina Absent R4002-21 , R4002-22
TS27: spinal cord Absent R4002-21 , R4002-22
TS27: thalamus Absent R4002-21 , R4002-22
TS27: trigeminal ganglion Absent R4002-21 , R4002-22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
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