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Gene Expression Data
Assay Details
Assay
Reference: J:93300 Blackshaw S, et al., Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
Assay type: RNA in situ
MGI Accession ID: MGI:3586000
Gene symbol: Scarb2
Gene name: scavenger receptor class B, member 2
Probe: UI-M-AH0-acs-f-09-0-UI.s1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: This data is from Supplemental Table 5, Gene column, row: 39288 Scavenger receptor class B, member 2 . After cryosectioning, tissue was fixed for 10' in 4% paraformaldehyde prior to processing.
Results
Specimen E12: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: retina Absent Submitted Image - AA8e12
Specimen E14: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: neural retinal epithelium Present Regionally restricted Submitted Image - AA8e14 Expression was detected in the inner neuroblastic layer and was weak in a subset of cells in the scleral outer neuroblastic layer.
Specimen E16: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: retina nuclear layer Present Regionally restricted Expression was detected in the inner neuroblastic layer and a subset of cells in the outer neuroblastic layer. The expression level was higher in the inner neuroblastic layer.
Specimen E18: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: retina inner nuclear layer Present Expression was detected in the inner neuroblastic layer.
TS26: retina outer nuclear layer Present Regionally restricted Expression was detected in a subset of cells in the scleral outer neuroblastic layer.
Specimen P0/1: postnatal day 0-1 (more )
Structure Level Pattern Image Note
TS27: retina inner nuclear layer Present Expression was detected in the inner neuroblastic layer.
TS27: retina outer nuclear layer Present Regionally restricted Expression was detected in subsets of cells in the scleral outer neuroblastic layer.
Specimen P2/3: postnatal day 2-3 (more )
Structure Level Pattern Image Note
TS27: retina inner nuclear layer Present Expression was detected in the inner neuroblastic layer.
TS27: retina outer nuclear layer Present Regionally restricted Expression was detected in subsets of cells in the scleral outer neuroblastic layer.
Specimen P4/5: postnatal day 4-5 (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Weak Regionally restricted Expression was detected in the vitreal outer neuroblastic layer.
Specimen Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retina layer Present Regionally restricted Expression was detected in cones and cone bipolars.
TS28: retina ganglion cell layer Present Regionally restricted Expression was detected in a subset of ganglion cells.
Specimen CNS: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: cerebellum external granule cell layer Present
TS28: hippocampus CA3 Present
Specimen Embryo: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: liver Strong
TS24: pigmented retinal epithelium Strong
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory