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Gene Expression Data
Assay Details
Assay
Reference: J:93300 Blackshaw S, et al., Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
Assay type: RNA in situ
MGI Accession ID: MGI:3585871
Gene symbol: Slc38a3
Gene name: solute carrier family 38, member 3
Probe: UI-M-AP0-abe-e-05-0-UI.s2
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: This data is from Supplemental Table 5, Gene column, row: 30058 Solute carrier family 38, member 3. After cryosectioning, tissue was fixed for 10' in 4% paraformaldehyde prior to processing.
Results
Specimen E12: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: retina Absent

Specimen E14: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: retina Absent S11_Slc38a3 E14 , Submitted Image - 7be14

Specimen E16: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: pigmented retinal epithelium Present S11_Slc38a3 E16 , Submitted Image - 7Be16.5
TS24: retina nuclear layer Weak Regionally restricted Submitted Image - 7Be16.5 , S11_Slc38a3 E16 Expression was detected in a subset of cells in the outer neuroblastic layer.

Specimen E18: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: pigmented retinal epithelium Present Submitted Image - 7Be18.5 , S11_Slc38a3 E18
TS26: retina outer nuclear layer Present Regionally restricted S11_Slc38a3 E18 , Submitted Image - 7Be18.5 Expression was detected in a subset of cells in the outer neuroblastic layer.

Specimen P0/1: postnatal day 0-1 (more )
Structure Level Pattern Image Note
TS27: retina outer nuclear layer Present Regionally restricted Submitted Image - 7Bp1.5 , S11_Slc38a3 P0 , Submitted Image - 7Bp0.5 Expression was detected in the vitreal outer neuroblastic layer.
TS27: pigmented retinal epithelium Present Submitted Image - 7Bp1.5 , S11_Slc38a3 P0 , Submitted Image - 7Bp0.5

Specimen P2/3: postnatal day 2-3 (more )
Structure Level Pattern Image Note
TS27: retina outer nuclear layer Present Regionally restricted Submitted Image - 7Bp2.5 , Submitted Image - 7Bp3.5 , S11_Slc38a3 P2 Expression was detected in the vitreal outer neuroblastic layer.
TS27: pigmented retinal epithelium Present Submitted Image - 7Bp2.5 , Submitted Image - 7Bp3.5 , S11_Slc38a3 P2

Specimen P4/5: postnatal day 4-5 (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Present Regionally restricted Submitted Image - 7Bp5.5 , S11_Slc38a3 P4 , Submitted Image - 7Bp4.5 Expression was detected in the vitreal outer neuroblastic layer.
TS28: pigmented retinal epithelium Present S11_Slc38a3 P4 , Submitted Image - 7Bp5.5 , Submitted Image - 7Bp4.5

Specimen P6/7: postnatal day 6-7 (more )
Structure Level Pattern Image Note
TS28: retina Present Regionally restricted S11_Slc38a3 P6 , Submitted Image - 7Bp6.5 , Submitted Image - 7Bp7.5 Expression was detected in the Muller glia.

Specimen P8/10: postnatal day 8-10 (more )
Structure Level Pattern Image Note
TS28: retina Present Regionally restricted Submitted Image - 7Bp8.5 , Submitted Image - 7Bp10.5 , Submitted Image - 7Bp9.5 Expression was detected in the Muller glia.

Specimen Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retina Present Regionally restricted S11_Slc38a3 Adult Expression was detected in the Muller glia.
TS28: pigmented retinal epithelium Present S11_Slc38a3 Adult

Specimen CNS: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: central nervous system Present Regionally restricted Expression was detected in glia.
TS28: brain ependyma Present Regionally restricted Expression was detected in ependymal cells.

Specimen Embryo: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: liver Present
TS24: skeletal muscle Present


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
The Jackson Laboratory