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Gene Expression Data
Assay Details
Assay
Reference: J:93819 Sedita J, et al., Differential expression of heparan sulfate 6-O-sulfotransferase isoforms in the mouse embryo suggests distinctive roles during organogenesis. Dev Dyn. 2004 Dec;231(4):782-94
Assay type: RNA in situ
MGI Accession ID: MGI:3526063
Gene symbol: Hs6st2
Gene name: heparan sulfate 6-O-sulfotransferase 2
Probe: 6OST2 cDNA2
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 1B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: foregut Present Regionally restricted 1B Expression is detected in the foregut mesoderm but absent in the foregut endoderm.
TS15: septum transversum Present 1B
TS15: trunk somite Present 1B

Specimen 1I: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: Rathke's pouch Absent 1I
TS15: infundibular recess of 3rd ventricle Absent 1I

Specimen 1K: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: Rathke's pouch Present 1K
TS17: infundibular recess of 3rd ventricle Absent 1K

Specimen 1M: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Absent 1M

Specimen 1P: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube basal columns Weak Regionally restricted 1P Low expression is detected in the motor neurons.
TS19: neural tube ventricular layer Weak 1P
TS19: dorsal root ganglion Absent 1P

Specimen 2E: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: trigeminal ganglion Absent 2E
TS22: pons Present Non-Uniform 2E Expression is predominantly vebtral.
TS22: choroid plexus Present 2E
TS22: thalamus Present 2E

Specimen 2F: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: trigeminal ganglion Absent 2F

Specimen 2G: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: pons Present Non-Uniform 2G Expression is predominantly ventral.

Specimen 2H: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: thalamus Present 2H

Specimen 2I: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: choroid plexus Present 2I

Specimen 3A: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: diencephalon Present Regionally restricted 3A Expression detected proximal to but not in the optic stalk and in the neurepithelium of the diencephalon.
TS15: optic stalk Present Regionally restricted 3A Expression detected proximal to but not in the optic stalk and in the neurepithelium of the diencephalon.

Specimen 3B: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: surface ectoderm Present 3B
TS17: optic stalk Present Regionally restricted 3B Expression detected in the anterior optic stalk.

Specimen 3C: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural retinal epithelium Strong 3C
TS19: pigmented retinal epithelium Strong 3C
TS19: surface ectoderm Strong 3C
TS19: lens vesicle Strong Regionally restricted 3C Expression is detected in the elongated cells along the dorsal aspect of the lens vesicle.

Specimen 3E: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: pigmented retinal epithelium Strong 3E
TS22: neural retinal epithelium Absent 3E

Specimen 3H: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: optic nerve Absent 3H
TS22: extrinsic ocular muscle Present 3H
TS22: perioptic mesenchyme Present 3H

Specimen 3L: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: olfactory epithelium Absent 3L

Specimen 4B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: trunk somite Present 4B
TS15: neural tube Absent 4B

Specimen 4D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: tail myocoele Present Regionally restricted 4D Expression is detected in the myotome adjacent to the differentiating somites.

Specimen 4E: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: pectoral girdle and thoracic body wall musculature Present Regionally restricted 4E Expression detected in the intercostal skeletal muscles.

Specimen 4F: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: tail paraxial mesenchyme Present Regionally restricted 4F Expression detected in the tail muscles.

Specimen 4G: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: heart atrium Present Regionally restricted 4G Expression is detected in the atrial mesoderm adjacent to the septum transversum.

Specimen 4H: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: pericardial component Present 4H Expression detected in the pericardium.
TS15: pericardio-peritoneal canal Present 4H Expression detected in the pericardium.

Specimen 4I: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: cardiac muscle tissue Present Regionally restricted 4I Expression localized to the myocardial layer adjacent to the intraventricular septum.

Specimen 4J: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: cardiac muscle tissue Present Regionally restricted 4J Expression localized to the myocardial layer adjacent to the intraventricular septum.

Specimen 4K: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: heart atrium Present 4K
TS22: heart ventricle Absent 4K

Specimen 5B Sec: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: foregut diverticulum mesenchyme Trace 5B inset , 5B section
TS13: alimentary system Present Regionally restricted 5B inset , 5B section Expression detected in the mesoderm associated with the septum transversum, the mesoderm rectangle of the extraembryonic tissues and the liver primordium.
TS13: extraembryonic component Present Regionally restricted 5B inset , 5B section Expression detected in the mesoderm associated with the septum transversum, the mesoderm rectangle of the extraembryonic tissues and the liver primordium.
TS13: septum transversum Present Regionally restricted 5B inset , 5B section Expression detected in the mesoderm associated with the septum transversum, the mesoderm rectangle of the extraembryonic tissues and the liver primordium.

Specimen 5D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: hepatic primordium Strong Regionally restricted 5D Strong expression is detected in the epithelium of the liver bud.
TS15: pancreas primordium Present Regionally restricted 5D Expression is detected in the epithelium of the pancreatic primordia.

Specimen 5F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: hepatic primordium parenchyma Absent 5F
TS17: trunk mesenchyme Present Regionally restricted 5F Expression present in the muscles of the diaphragm.
TS17: liver Present Regionally restricted 5F Expression detected in the mesothelial cells of the liver capsule.

Specimen 5H: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: pancreas Weak Regionally restricted 5H Expression is detected in the pancreas mesenchyme.

Specimen 5J: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch endoderm Present Regionally restricted 5J Expression does not extend beyond the 3rd Pharyngeal pouch.
TS15: branchial arch mesenchyme Weak Regionally restricted 5J Expression does not extend beyond the 3rd Pharyngeal pouch.

Specimen 5L: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: thyroid primordium Absent 5L

Specimen 6C: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: esophagus epithelium Absent 6C
TS17: trachea epithelium Absent 6C
TS17: embryo mesenchyme Present Regionally restricted 6C Present in the mesenchyme surrounding the oesophagus and trachea with higher levels ventrally.

Specimen 6F: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: lung mesenchyme Present 6F

Specimen 6G: embryonic day 11.0 (more )
Structure Level Pattern Image Note
TS18: esophagus epithelium Strong 6G

Specimen 6K: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: tooth epithelium Present 6K
TS22: tooth mesenchyme Absent 6K

Specimen 6N: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: vibrissa Present Regionally restricted 6N Expression detected in the mesenchyme of the vibrissae.

Specimen 7B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: forelimb bud mesenchyme Present Uniform 7B
TS15: hindlimb ridge mesenchyme Present Uniform 7B

Specimen 7E Sec: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: forelimb bud mesenchyme Present Regionally restricted 7E section Expression is detected in the proximal forelimb mesenchyme in an anterior and posterior domain

Specimen 7M Sec, 7N: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: limb digit Strong Non-Uniform 7M section , 7N Strong expression is detected in the skeletal muscle of the developing digits with lower expression in the joints and perichondrium.

Specimen 8B: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: mesonephros mesenchyme Present 8B
TS16: gonad primordium Weak Regionally restricted 8B Expression is detected in the genital ridge.

Specimen 8D: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: mesonephros mesenchyme Present 8D
TS17: gonad primordium Weak Regionally restricted 8D Weak expression detected in the genital ridge.

Specimen 8F: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: mesenchyme of metanephros Present Regionally restricted 8F Expression detected in the peripheral mesenchyme of the kidney.

Specimen 8H Sec: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: gonad Present 8H section

Specimen not shown: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: head somite Strong
TS13: trunk somite Strong


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory