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Gene Expression Data
Assay Details
Assay
Reference: J:85959 Aruga J, et al., Identification and characterization of Slitrk, a novel neuronal transmembrane protein family controlling neurite outgrowth. Mol Cell Neurosci. 2003 Sep;24(1):117-29
Assay type: RNA in situ
MGI Accession ID: MGI:2680224
Gene symbol: Slitrk2
Gene name: SLIT and NTRK-like family, member 2
Probe: Slitrk2 probe2
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3b: embryonic day 17.0 (more )
Structure Level Pattern Image Note
TS25: hippocampus Present Regionally restricted 3b Expression was detected in the pyramidal layer and the subicular neuroepithelium.
TS25: hypothalamus Present Regionally restricted 3b Expression was detected in the ventromedial hypothalamus.
TS25: thalamus Present 3b
TS25: diencephalon Present Regionally restricted 3b Expression was detected in the neuroepithelium adjacent to the third ventricle.

Specimen 3h: embryonic day 17.0 (more )
Structure Level Pattern Image Note
TS25: cerebral cortex ventricular zone Strong 3h
TS25: cortical plate Present Regionally restricted 3h Expression was detected in the superficial layer of the cortical plate.
TS25: cerebral cortex subventricular zone Present 3h

Specimen 4b: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: neural tube ventricular layer Strong Regionally restricted 4b Expression was strong on the ventral side.
TS19: neural tube floor plate Absent 4b
TS19: neural tube basal columns Strong Regionally restricted 4b Expression was strong in the ventral motor column.
TS19: dorsal root ganglion Present 4b
TS19: spinal nerve Present Regionally restricted 4b Expression was detected in the ventral nerve roots.
TS19: future spinal cord Weak 4b

Specimen 4d: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: spinal cord ventricular layer Strong Regionally restricted 4d Expression was strong ventrally.
TS22: spinal cord floor plate Absent 4d
TS22: basal columns Strong Regionally restricted 4d Expression was strong in the ventral motor columns.
TS22: dorsal root ganglion Present 4d
TS22: spinal nerve Present Regionally restricted 4d Expression was detected in the ventral nerve roots.

Specimen 4f: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: ventral grey horn Present 4f


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
01/28/2026
MGI 6.24
The Jackson Laboratory