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Gene Expression Data
Assay Details
Assay
Reference: J:73075 Dahmane N, et al., The Sonic Hedgehog-Gli pathway regulates dorsal brain growth and tumorigenesis. Development. 2001 Dec;128(24):5201-12
Assay type: RNA in situ
MGI Accession ID: MGI:2156850
Gene symbol: Gli1
Gene name: GLI-Kruppel family member GLI1
Probe: Gli cDNA3
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 1A: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex subventricular zone Present 1A Expression is at higher levels in the deeper cortical ventricular and subventricular zones.
TS23: cerebral cortex ventricular layer Present 1A Expression is at higher levels in the deeper cortical ventricular and subventricular zones.
TS23: corpus striatum Present 1A Expression is present in the ventricular zone.
TS23: tectum Present 1A Expression is present in the ventricular zone.

Specimen Not shown: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Present Expression is present in the ventricular zone of the olfactory bulb.

Specimen 1B: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: cerebral cortex ventricular zone Present 1B
TS25: cortical plate Present Scattered 1B Expression is present in scattered cells within the cortical plate.
TS25: brain Weak Scattered 1B

Specimen 1C: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: midbrain tegmentum Present Regionally restricted 1C Expression is present within the ventricular zone.
TS25: tectum Present Regionally restricted 1C Expression is present within the ventricular zone.
TS25: cerebellum Present Regionally restricted 1C Expression is present within the external germinal layer (EGL) and Purkinje cell layer.

Specimen 1N: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: cerebral cortex Present Regionally restricted 1N Expression is present within the ventricular and subventricular layers.
TS28: dentate gyrus Present 1N

Specimen 1O: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: brain Weak Scattered 1O

Specimen 1Q: postnatal day 5 (more )
Structure Level Pattern Image Note
TS28: brain Weak Scattered 1Q
TS28: cerebral cortex Present Scattered 1Q

Specimen Not shown: postnatal day 1 (more )
Structure Level Pattern Image Note
TS27: cerebral cortex Present
TS27: dentate gyrus Present


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory