Gene Expression Data
Assay Details
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Assay
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Reference:
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J:71995
Kinder SJ, et al., The organizer of the mouse gastrula is composed of a dynamic population of progenitor cells for the axial mesoderm. Development. 2001 Sep;128(18):3623-34
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:2154955
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Gene symbol:
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Foxa2
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Gene name:
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forkhead box A2
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Probe:
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Hnf3b cDNA4
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Results
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Specimen
1A, ES:
embryonic day 6.5
(more  )
Note: Early streak stage.
Specimen
1A, ES:
(close  )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 6.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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Early streak stage.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS9: anterior visceral endoderm |
Present |
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1A ES
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| TS9: embryo |
Present |
Regionally restricted |
1A ES
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Expression is detected in the epiblast distal to the newly formed primitive streak and in the posterior germ layer at the location of the early-gastrul organizer.
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Specimen
1A, MS:
embryonic day 7.0
(more )
Note: Embryo is at the mid-streak stage.
Specimen
1A, MS:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 7.0
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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Embryo is at the mid-streak stage.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS10: primitive streak |
Present |
Regionally restricted |
1A MS
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Expression is detected at the anterior end of the elongating primitive streak.
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Specimen
1A, LS:
embryonic day 7.0
(more )
Note: Embryo is at the late streak stage.
Specimen
1A, LS:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 7.0
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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Embryo is at the late streak stage.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS10: embryo ectoderm |
Present |
Regionally restricted |
1A LS
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Expression is detected in the prospective foregut endoderm, the axial mesoderm, the mesoderm and ectoderm of the prospective cranial region and is shifted distally with the extension of the primitive streak.
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| TS10: embryo endoderm |
Present |
Regionally restricted |
1A LS
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Expression is detected in the prospective foregut endoderm, the axial mesoderm, the mesoderm and ectoderm of the prospective cranial region and is shifted distally with the extension of the primitive streak.
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| TS10: embryo mesoderm |
Present |
Regionally restricted |
1A LS
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Expression is detected in the prospective foregut endoderm, the axial mesoderm, the mesoderm and ectoderm of the prospective cranial region and is shifted distally with the extension of the primitive streak.
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| TS10: primitive streak |
Present |
Regionally restricted |
1A LS
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Expression is detected in the prospective foregut endoderm, the axial mesoderm, the mesoderm and ectoderm of the prospective cranial region and is shifted distally with the extension of the primitive streak.
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Specimen
1A, EB:
embryonic day 7.5
(more )
Note: Embryo is at the early bud stage.
Specimen
1A, EB:
(close )
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Genetic Background:
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Not Specified
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Age:
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embryonic day 7.5
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Age Note:
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Theiler stage of this specimen assigned by curators from EMAGE.
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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Embryo is at the early bud stage.
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Analysis Tools