Gene Expression Data
Assay Details
|
Assay
|
|
Reference:
|
J:1108
Schatteman GC, et al., Regulation and role of PDGF receptor alpha-subunit expression during embryogenesis. Development. 1992 May;115(1):123-31
|
|
Assay type:
|
RNA in situ
|
|
MGI Accession ID:
|
MGI:2148794
|
|
Gene symbol:
|
Pdgfra
|
|
Gene name:
|
platelet derived growth factor receptor, alpha polypeptide
|
|
Probe:
|
2C-3
|
|
Probe preparation:
|
Antisense labelled with S35 RNA
|
|
Visualized with:
|
Autoradiography
|
|
Assay notes:
|
Probe hydrolyzed to an average size of 150 bp.
|
|
|
Results
|
Specimen
Not shown:
embryonic day 6.5
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 6.5
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
Specimen
Not shown:
embryonic day 7.0
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 7.0
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
Specimen
Not shown:
embryonic day 7.5
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 7.5
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
Specimen
Not shown:
embryonic day 8.0
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 8.0
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
Specimen
Not shown:
embryonic day 9.0
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 9.0
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
Specimen
Not shown:
embryonic day 9.5
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 9.5
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
Specimen
2:
embryonic day 10.0
(more )
Specimen
2:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 10.0
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
Specimen
Not shown:
embryonic day 10.0
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 10.0
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
Specimen
Not shown:
embryonic day 11.0
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 11.0
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS18: embryo |
Strong |
Regionally restricted |
|
Expression resembles that seen at E10.0.
|
Specimen
4:
embryonic day 12.0
(more )
Specimen
4:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 12.0
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
Specimen
9:
embryonic day 12.0
(more )
Specimen
9:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 12.0
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS19: lens vesicle |
Strong |
|
9
|
Expression is present within the epithelial cells that are forming the lens of the eye.
|
| TS19: retina |
Absent |
|
9
|
There is no expression within the optic cup.
|
Specimen
Not shown:
embryonic day 12.0
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 12.0
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS19: heart |
Present |
Regionally restricted |
|
Although there is expression elsewhere in the heart, there in none in the endocardium.
|
| TS19: peripheral nervous system |
Absent |
|
|
There is no expression in the neural crest-derived proximal trigeminal, sensory, and sympathetic ganglia.
|
| TS19: gut |
Absent |
|
|
There is no expression in the definitive endodermal derivatives.
|
| TS19: embryo |
Present |
Regionally restricted |
|
Although there is expression elsewhere in the embryo, there is no expression in muscle nor in endothelium.
|
Specimen
5:
embryonic day 14.0
(more )
Specimen
5:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 14.0
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS21: embryo mesenchyme |
Present |
Graded |
5
|
Expression is present throughout the mesenchyme but is particularly intense where mesenchyme is surrounding developing cartilage and bone; around blood vessels; and where mesenchyme and epithelium are interacting to form new organs.
|
| TS21: tail sclerotome |
Strong |
|
5
|
Expression is strong in the sclerotomes. The condrocytic core of the cartilage is losing expression.
|
| TS21: axial skeleton |
Strong |
Regionally restricted |
5
|
Expression is strong within the perichondrium and periosteum of the developing bones. There is no expression in the osteoblasts.
|
| TS21: heart |
Present |
Regionally restricted |
5
|
Some expression is present in the ventricular trabeculae and in a minority of the myocardium. No expression is present within the endocardium.
|
| TS21: pericardium |
Present |
|
5
|
|
| TS21: dermis |
Present |
|
5
|
|
| TS21: blood vessel |
Absent |
|
5
|
There is no expression in the endothelium.
|
Specimen
Not shown:
embryonic day 14.0
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 14.0
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
Specimen
Not shown:
embryonic day 15.5
(more )
Specimen
Not shown:
(close )
|
Genetic Background:
|
either: BALB/c or C57BL/6J
|
|
Age:
|
embryonic day 15.5
|
|
Age Note:
|
Age normalized so that noon of plug day = E0.5.
|
|
Sex:
|
Not Specified
|
|
Type:
|
section
|
|
Fixation:
|
10% Formalin
|
|
Embedding:
|
Paraffin
|
| Structure |
Level |
Pattern |
Image |
Note |
| TS23: heart valve |
Strong |
|
|
|
| TS23: heart |
Present |
Regionally restricted |
|
There are small pockets of labeling in the myocardium.
|
| TS23: peripheral nervous system |
Absent |
|
|
There is no expression in neural crest-derived proximal trigeminal, sensory, and sympathetic ganglia.
|
| TS23: embryo mesenchyme |
Present |
Graded |
|
Expression is present throughout the mesenchyme but is particularly intense where mesenchyme is surrounding developing cartilage and bone; around blood vessels; and where mesenchyme and epithelium are interacting to form new organs.
|
|