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Gene Expression Data
Assay Details
Assay
Reference: J:36832 Stoykova A, et al., Forebrain patterning defects in Small eye mutant mice. Development. 1996 Nov;122(11):3453-65
Assay type: RNA in situ
MGI Accession ID: MGI:2148109
Gene symbol: Dlx1
Gene name: distal-less homeobox 1
Probe: Dlx-specific probe
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 1B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 1B Expression in two large domains. Region between domains (see below). ('optoeminential zone') does not show expression, except for small subdomain within the supraoptic paraventricular (SPV) area.
TS20: telencephalon Present Regionally restricted 1B Telencephalic domain includes septum (SE), diagonal band (DB), anterior entopeduncular area (AEP), anterior preooptic area (POA).
TS20: diencephalon Present Regionally restricted 1B Thalamo-hypothalamic domain includes ventral thalamus (VT), posterior entodpeduncular area (PEP), hypothalamic cell cord (HCC), suprachiasmatic area (SCH).
TS20: lateral ganglionic eminence Present 1B
TS20: medial ganglionic eminence Present 1B

Specimen 1D: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 1D
TS20: hypothalamus Present Regionally restricted 1D Compartmentalization is disturbed; expression becomes widely disperse and extends beyond normal sharp boundaries.

Specimen 1F: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 1F Expression in two large domains. Region between domains (see below). ('optoeminential zone') does not show expression, except for small subdomain within the supraoptic paraventricular (SPV) area.
TS20: telencephalon Present Regionally restricted 1F Telencephalic domain includes septum (SE), diagonal band (DB), anterior entopeduncular area (AEP), anterior preooptic area (POA).
TS20: diencephalon Present Regionally restricted 1F Thalamo-hypothalamic domain includes ventral thalamus (VT), posterior entodpeduncular area (PEP), hypothalamic cell cord (HCC), suprachiasmatic area (SCH).
TS20: hypothalamus Present Regionally restricted 1F Specifically delineates regions of hypothalamic cell cord (HCC).
TS20: lateral ganglionic eminence Present 1F
TS20: medial ganglionic eminence Present 1F

Specimen 1H: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 1H
TS20: hypothalamus Present Regionally restricted 1H Compartmentalization is disturbed; expression becomes widely disperse and extends beyond normal sharp boundaries.

Specimen 1J: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 1J Expression in two large domains. Region between domains (see below). ('optoeminential zone') does not show expression, except for small subdomain within the supraoptic paraventricular (SPV) area.
TS20: telencephalon Present Regionally restricted 1J Telencephalic domain includes septum (SE), diagonal band (DB), anterior entopeduncular area (AEP), anterior preooptic area (POA).
TS20: diencephalon Present Regionally restricted 1J Thalamo-hypothalamic domain includes ventral thalamus (VT), posterior entodpeduncular area (PEP), hypothalamic cell cord (HCC), suprachiasmatic area (SCH).
TS20: thalamus Present Regionally restricted 1J Domain includes regions of ventral thalamus (VT), but not the dorsalmost region of the VT.
TS20: hypothalamus Present Regionally restricted 1J Specifically delineates regions of hypothalamic cell cord (HCC).
TS20: lateral ganglionic eminence Present 1J
TS20: medial ganglionic eminence Present 1J

Specimen 1L: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 1L

Specimen 1N: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 1N Expression in two large domains. Region between domains (see below). ('optoeminential zone') does not show expression, except for small subdomain within the supraoptic paraventricular (SPV) area.
TS20: diencephalon Present Regionally restricted 1N Thalamo-hypothalamic domain includes ventral thalamus (VT), posterior entodpeduncular area (PEP), hypothalamic cell cord (HCC), suprachiasmatic area (SCH).
TS20: thalamus Present Regionally restricted 1N Domain includes regions of ventral thalamus (VT), but not the dorsalmost region of the VT.
TS20: hypothalamus Present Regionally restricted 1N Specifically delineates regions of hypothalamic cell cord (HCC).

Specimen 1P: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 1P

Specimen 2B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 2B Expression in two large domains. Region between domains (see below). ('optoeminential zone') does not show expression, except for small subdomain within the supraoptic paraventricular (SPV) area.
TS20: telencephalon Present Regionally restricted 2B Telencephalic domain includes septum (SE), diagonal band (DB), anterior entopeduncular area (AEP), anterior preooptic area (POA).
TS20: lateral ganglionic eminence Present 2B
TS20: medial ganglionic eminence Present 2B

Specimen 2E: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 2E

Specimen 2H: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 2H Expression in two large domains. Region between domains (see below). ('optoeminential zone') does not show expression, except for small subdomain within the supraoptic paraventricular (SPV) area.
TS20: telencephalon Present Regionally restricted 2H Telencephalic domain includes septum (SE), diagonal band (DB), anterior entopeduncular area (AEP), anterior preooptic area (POA).
TS20: diencephalon Present Regionally restricted 2H Thalamo-hypothalamic domain includes ventral thalamus (VT), posterior entodpeduncular area (PEP), hypothalamic cell cord (HCC), suprachiasmatic area (SCH).
TS20: thalamus Present Regionally restricted 2H Domain includes regions of ventral thalamus (VT), but not the dorsalmost region of the VT.
TS20: lateral ganglionic eminence Present 2H
TS20: medial ganglionic eminence Present 2H

Specimen 2K: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 2K

Specimen 2N: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 2N Expression in two large domains. Region between domains (see below). ('optoeminential zone') does not show expression, except for small subdomain within the supraoptic paraventricular (SPV) area.
TS20: diencephalon Present Regionally restricted 2N Thalamo-hypothalamic domain includes ventral thalamus (VT), posterior entodpeduncular area (PEP), hypothalamic cell cord (HCC), suprachiasmatic area (SCH).
TS20: thalamus Present Regionally restricted 2N Domain includes regions of ventral thalamus (VT), but not the dorsalmost region of the VT.

Specimen 2Q: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 2Q

Specimen 2T: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 2T Expression in two large domains. Region between domains (see below). ('optoeminential zone') does not show expression, except for small subdomain within the supraoptic paraventricular (SPV) area.
TS20: diencephalon Present Regionally restricted 2T Thalamo-hypothalamic domain includes ventral thalamus (VT), posterior entodpeduncular area (PEP), hypothalamic cell cord (HCC), suprachiasmatic area (SCH).
TS20: thalamus Present Regionally restricted 2T Domain includes regions of ventral thalamus (VT), but not the dorsalmost region of the VT.
TS20: hypothalamus Present Regionally restricted 2T Specifically delineates regions of hypothalamic cell cord (HCC).

Specimen 2W: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 2W

Specimen 3B: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: forebrain Present Regionally restricted 3B Expression a subset of cells in the paraventricular nucleus (PA) and a stream of cells forming a part of the ventral lateral geniculate body (VLG).
TS22: hypothalamus Present Regionally restricted 3B Expression in the hypothalamic anterodorsal nucleus.

Specimen 3D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: forebrain Present Regionally restricted 3D Expression a subset of cells in the paraventricular nucleus (PA) and a stream of cells forming a part of the ventral lateral geniculate body (VLG).

Specimen 3F: embryonic day 14.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS22: forebrain Present Regionally restricted 3F
TS22: telencephalon Present Regionally restricted 3F Authors report that abnormal expression in cortical areas has further expanded.

Specimen 3H: embryonic day 14.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS22: forebrain Present Regionally restricted 3H
TS22: diencephalon Present Regionally restricted 3H Extensive labelling only in lateral diencephalic regions.

Specimen 4B: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: forebrain Present Regionally restricted 4B Expression a subset of cells in the paraventricular nucleus (PA) and a stream of cells forming a part of the ventral lateral geniculate body (VLG).

Specimen 4D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: forebrain Present Regionally restricted 4D Expression a subset of cells in the paraventricular nucleus (PA) and a stream of cells forming a part of the ventral lateral geniculate body (VLG).
TS22: thalamus Present Regionally restricted 4D Expression in the central part of the ventral thalamus (zone incerta, ZI; reticular thalamic nuclei, RT).

Specimen 4F: embryonic day 14.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS22: forebrain Present Regionally restricted 4F
TS22: telencephalon Present Regionally restricted 4F Authors report that abnormal expression in cortical areas has further expanded.
TS22: diencephalon Present Regionally restricted 4F Extensive labelling only in lateral diencephalic regions.

Specimen 4H: embryonic day 14.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS22: forebrain Present Regionally restricted 4H
TS22: telencephalon Present Regionally restricted 4H Authors report that abnormal expression in cortical areas has further expanded.
TS22: diencephalon Present Regionally restricted 4H Extensive labelling only in lateral diencephalic regions.

Specimen 5B: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: forebrain Present Regionally restricted 5B Diffuse signal in rostral zona incerta and reticular nucleus; few cells in paraventricular nucleus. Abundant in ventral lateral geniculate body, striatal and pallidal subventricular zone; sharp boundary at level of caudate-putamen.

Specimen 5D: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: forebrain Present Regionally restricted 5D Diffuse signal in rostral zona incerta and reticular nucleus; few cells in paraventricular nucleus. Abundant in ventral lateral geniculate body, striatal and pallidal subventricular zone; sharp boundary at level of caudate-putamen.
TS26: telencephalon Weak Regionally restricted 5D Faint signal in ventricular zone and subventricular zone of dorsal telencephalon.
TS26: hypothalamus Present Regionally restricted 5D Expression within anterodorsal and mediodorsal hypothalamic nucleus.

Specimen 5F: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: forebrain Present Regionally restricted 5F Diffuse signal in rostral zona incerta and reticular nucleus; few cells in paraventricular nucleus. Abundant in ventral lateral geniculate body, striatal and pallidal subventricular zone; sharp boundary at level of caudate-putamen.
TS26: telencephalon Weak Regionally restricted 5F Faint signal in ventricular zone and subventricular zone of dorsal telencephalon.
TS26: hypothalamus Present Regionally restricted 5F

Specimen 5H: embryonic day 18.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS26: forebrain Present Regionally restricted 5H

Specimen 5J: embryonic day 18.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS26: forebrain Present Regionally restricted 5J

Specimen 5L: embryonic day 18.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS26: forebrain Present Regionally restricted 5L

Specimen 6A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 6A Expression in two large domains. Region between domains (see below). ('optoeminential zone') does not show expression, except for small subdomain within the supraoptic paraventricular (SPV) area.
TS20: telencephalon Present Regionally restricted 6A Telencephalic domain includes septum (SE), diagonal band (DB), anterior entopeduncular area (AEP), anterior preooptic area (POA).
TS20: lateral ganglionic eminence Present 6A
TS20: medial ganglionic eminence Present 6A

Specimen 6B: embryonic day 12.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS20: forebrain Present Regionally restricted 6B

Specimen 6C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: forebrain Present Regionally restricted 6C Expression a subset of cells in the paraventricular nucleus (PA) and a stream of cells forming a part of the ventral lateral geniculate body (VLG).

Specimen 6D: embryonic day 14.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS22: forebrain Present Regionally restricted 6D
TS22: telencephalon Present Regionally restricted 6D Authors report that abnormal expression in cortical areas has further expanded.

Specimen 6F: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: forebrain Present Regionally restricted 6F Expression a subset of cells in the paraventricular nucleus (PA) and a stream of cells forming a part of the ventral lateral geniculate body (VLG).

Specimen 6H: embryonic day 14.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS22: forebrain Present Regionally restricted 6H
TS22: telencephalon Present Regionally restricted 6H Authors report that abnormal expression in cortical areas has further expanded.


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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory