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Gene Expression Data
Assay Details
Assay
Reference: J:33651 Hunt P, et al., The branchial Hox code and its implications for gene regulation, patterning of the nervous system and head evolution. Development. 1991;Suppl 2:63-77
Assay type: RNA in situ
MGI Accession ID: MGI:1928952
Gene symbol: Hoxa1
Gene name: homeobox A1
Results
Specimen 5B: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: future brain Absent 5B
TS15: neural tube Absent 5B
TS15: cranial preganglion Absent 5B
Specimen 5D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: foregut Present Regionally restricted 5D Expression in the lining of the foregut.
TS15: 3rd branchial arch ectoderm Present 5D Expression in the ectoderm and mesenchyme of the third branchial arch and posterior regions.
TS15: 3rd branchial arch mesenchyme Present 5D Expression in the ectoderm and mesenchyme of the third branchial arch and posterior regions.
Specimen 5E: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: foregut Present Regionally restricted 5E Expression in the lining of the foregut.
TS15: 3rd branchial arch ectoderm Present 5E Expression in the ectoderm and mesenchyme of the third branchial arch and posterior regions.
TS15: 3rd branchial arch mesenchyme Present 5E Expression in the ectoderm and mesenchyme of the third branchial arch and posterior regions.
Specimen not shown: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: anterior pro-rhombomere Present Restricted expression in the hindbrain with a r3/4 boundary.
TS12: posterior pro-rhombomere Present Restricted expression in the hindbrain with a r3/4 boundary.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
MGI 6.23 		The Jackson Laboratory