Gene Expression Data
Assay Details
Assay
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Reference:
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J:32084
Murphy P, et al., Expression of the mouse labial-like homeobox-containing genes, Hox 2.9 and Hox 1.6, during segmentation of the hindbrain. Development. 1991 Jan;111(1):61-74
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:1928493
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Gene symbol:
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Hoxb1
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Gene name:
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homeobox B1
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Probe:
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Hox 2.9 probe1
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Results
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Specimen
3. A., B.:
embryonic day 7.5
(more )
Specimen
3. A., B.:
(close )
Genetic Background:
|
Swiss
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Age:
|
embryonic day 7.5
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Sex:
|
Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: embryo mesenchyme |
Present |
Regionally restricted |
3A/B
|
Expression is detected within the primitive streak in the newly formed mesoderm and overlying neurectoderm.
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TS11: neural ectoderm |
Present |
Regionally restricted |
3A/B
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Expression is detected within the primitive streak in the newly formed mesoderm and overlying neurectoderm.
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TS11: primitive streak |
Present |
Regionally restricted |
3A/B
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Expression is detected within the primitive streak in the newly formed mesoderm and overlying neurectoderm.
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Specimen
4. C.:
embryonic day 8.0
(more )
Specimen
4. C.:
(close )
Genetic Background:
|
Swiss
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Age:
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embryonic day 8.0
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Sex:
|
Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: embryo mesenchyme |
Strong |
Regionally restricted |
4C
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Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
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TS12: future hindbrain |
Strong |
Regionally restricted |
4C
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Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
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TS12: future hindbrain neural ectoderm |
Strong |
Regionally restricted |
4C
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Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
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TS12: neural ectoderm |
Strong |
Regionally restricted |
4C
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Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
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TS12: pre-otic sulcus |
Strong |
Regionally restricted |
4C
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Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
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Specimen
4. G.:
embryonic day 8.5
(more )
Specimen
4. G.:
(close )
Genetic Background:
|
Swiss
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Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: future hindbrain |
Present |
Regionally restricted |
4G
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Expression is restricted to the hindbrain with the anterior boundary of expression at the pre-otic sulcus.
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TS13: pre-otic sulcus |
Present |
Regionally restricted |
4G
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Expression is restricted to the hindbrain with the anterior boundary of expression at the pre-otic sulcus.
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Specimen
4. J.:
embryonic day 8.75
(more )
Specimen
4. J.:
(close )
Genetic Background:
|
Swiss
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Age:
|
embryonic day 8.75
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Sex:
|
Not Specified
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Type:
|
section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
5. A., B.:
embryonic day 8.75
(more )
Specimen
5. A., B.:
(close )
Genetic Background:
|
Swiss
|
Age:
|
embryonic day 8.75
|
Sex:
|
Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS14: migrating neural crest |
Present |
Regionally restricted |
5A/B
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Expression is detected in neural crest cells migrating from rhombomere 4.
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TS14: rhombomere 4 |
Present |
Regionally restricted |
5A/B
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Expression is detected in neural crest cells migrating from rhombomere 4.
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Specimen
5. D., E.:
embryonic day 8.75
(more )
Specimen
5. D., E.:
(close )
Genetic Background:
|
Swiss
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Age:
|
embryonic day 8.75
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Sex:
|
Not Specified
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Type:
|
section
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Fixation:
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4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
5. G., H.:
embryonic day 9.5
(more )
Specimen
5. G., H.:
(close )
Genetic Background:
|
Swiss
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Age:
|
embryonic day 9.5
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Sex:
|
Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
|
Paraffin
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Specimen
5. J., K.:
embryonic day 9.5
(more )
Specimen
5. J., K.:
(close )
Genetic Background:
|
Swiss
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Age:
|
embryonic day 9.5
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Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: gut |
Present |
Regionally restricted |
5J/K
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Expression is detected in the gut associated mesoderm at and below the level of the heart, in the surface ectoderm adjacent to the labelled gut mesoderm.
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TS15: surface ectoderm |
Present |
Regionally restricted |
5J/K
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Expression is detected in the gut associated mesoderm at and below the level of the heart, in the surface ectoderm adjacent to the labelled gut mesoderm.
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TS15: tail unsegmented mesenchyme |
Present |
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5J/K
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TS15: nephric duct |
Present |
|
5J/K
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TS15: neural tube |
Present |
Graded |
5J/K
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Expression is detected in the neural tube in a posterior to anterior gradient.
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Specimen
6. Left:
embryonic day 10.5
(more )
Specimen
6. Left:
(close )
Genetic Background:
|
Swiss
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS17: rhombomere 4 |
Present |
Regionally restricted |
6A/B left
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Expression is detected in Rhombomere 4 but is absent in the floorplate.
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Specimen
6. Center:
embryonic day 10.5
(more )
Specimen
6. Center:
(close )
Genetic Background:
|
Swiss
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Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
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Type:
|
section
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Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
6. Right:
embryonic day 10.5
(more )
Specimen
6. Right:
(close )
Genetic Background:
|
Swiss
|
Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
7. B.:
embryonic day 10.5
(more )
Specimen
7. B.:
(close )
Genetic Background:
|
Swiss
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Age:
|
embryonic day 10.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Specimen
7. E.:
embryonic day 11.5
(more )
Specimen
7. E.:
(close )
Genetic Background:
|
Swiss
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Age:
|
embryonic day 11.5
|
Sex:
|
Not Specified
|
Type:
|
section
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Fixation:
|
4% Paraformaldehyde
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Embedding:
|
Paraffin
|
Specimen
E 9.5:
embryonic day 9.5
(more )
Specimen
E 9.5:
(close )
Genetic Background:
|
Swiss
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Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: neural tube |
Present |
Graded |
|
Expression is detected in the neural tube in a dorsoventral gradient.
|
Specimen
E 12.5:
embryonic day 12.5
(more )
Specimen
E 12.5:
(close )
Genetic Background:
|
Swiss
|
Age:
|
embryonic day 12.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Fixation:
|
4% Paraformaldehyde
|
Embedding:
|
Paraffin
|
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