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Gene Expression Data
Assay Details
Assay
Reference: J:32084 Murphy P, et al., Expression of the mouse labial-like homeobox-containing genes, Hox 2.9 and Hox 1.6, during segmentation of the hindbrain. Development. 1991 Jan;111(1):61-74
Assay type: RNA in situ
MGI Accession ID: MGI:1928493
Gene symbol: Hoxb1
Gene name: homeobox B1
Probe: Hox 2.9 probe1
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 3. A., B.: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo mesenchyme Present Regionally restricted 3A/B Expression is detected within the primitive streak in the newly formed mesoderm and overlying neurectoderm.
TS11: neural ectoderm Present Regionally restricted 3A/B Expression is detected within the primitive streak in the newly formed mesoderm and overlying neurectoderm.
TS11: primitive streak Present Regionally restricted 3A/B Expression is detected within the primitive streak in the newly formed mesoderm and overlying neurectoderm.

Specimen 4. C.: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: embryo mesenchyme Strong Regionally restricted 4C Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
TS12: future hindbrain Strong Regionally restricted 4C Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
TS12: future hindbrain neural ectoderm Strong Regionally restricted 4C Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
TS12: neural ectoderm Strong Regionally restricted 4C Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.
TS12: pre-otic sulcus Strong Regionally restricted 4C Expression is detected in the neurectoderm and mesoderm extending from the posterior of the embryo into the region of the developing hindbrain with a sharp boundary at the preotic sulcus.

Specimen 4. G.: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future hindbrain Present Regionally restricted 4G Expression is restricted to the hindbrain with the anterior boundary of expression at the pre-otic sulcus.
TS13: pre-otic sulcus Present Regionally restricted 4G Expression is restricted to the hindbrain with the anterior boundary of expression at the pre-otic sulcus.

Specimen 4. J.: embryonic day 8.75 (more )
Structure Level Pattern Image Note
TS14: rhombomere 4 Present 4J
TS14: embryo mesenchyme Present 4J Expression is detected in the mesoderm lateral to rhombomere four where the sensory ganglia are condensing.

Specimen 5. A., B.: embryonic day 8.75 (more )
Structure Level Pattern Image Note
TS14: migrating neural crest Present Regionally restricted 5A/B Expression is detected in neural crest cells migrating from rhombomere 4.
TS14: rhombomere 4 Present Regionally restricted 5A/B Expression is detected in neural crest cells migrating from rhombomere 4.

Specimen 5. D., E.: embryonic day 8.75 (more )
Structure Level Pattern Image Note
TS14: mesenchyme derived from lateral plate Present Regionally restricted 5D/E Expression detected in the lateral plate mesoderm as far as the anterior headfold.
TS14: trunk unsegmented mesenchyme Present 5D/E
TS14: trunk somite Weak 5D/E

Specimen 5. G., H.: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: gut Present Regionally restricted 5G/H Expression is detected in the gut epithelium at the level of the forelimb bud and the gut associated mesoderm at and below the level of the heart.
TS15: rhombomere 4 Strong 5G/H
TS15: tail unsegmented mesenchyme Present 5G/H

Specimen 5. J., K.: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: gut Present Regionally restricted 5J/K Expression is detected in the gut associated mesoderm at and below the level of the heart, in the surface ectoderm adjacent to the labelled gut mesoderm.
TS15: surface ectoderm Present Regionally restricted 5J/K Expression is detected in the gut associated mesoderm at and below the level of the heart, in the surface ectoderm adjacent to the labelled gut mesoderm.
TS15: tail unsegmented mesenchyme Present 5J/K
TS15: nephric duct Present 5J/K
TS15: neural tube Present Graded 5J/K Expression is detected in the neural tube in a posterior to anterior gradient.

Specimen 6. Left: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: rhombomere 4 Present Regionally restricted 6A/B left Expression is detected in Rhombomere 4 but is absent in the floorplate.

Specimen 6. Center: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: rhombomere 4 Present Regionally restricted 6A/B center Expression is detected in Rhombomere 4 but is absent in the floorplate.
TS17: rhombomere 4 floor plate Absent 6A/B center

Specimen 6. Right: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: rhombomere 4 Present Regionally restricted 6A/B right Expression is detected in Rhombomere 4 but is absent in the floorplate.
TS17: rhombomere 4 floor plate Absent 6A/B right

Specimen 7. B.: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: embryo mesenchyme Weak 7B

Specimen 7. E.: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: embryo mesenchyme Absent 7E
TS19: hindbrain Weak 7E

Specimen E 9.5: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present Graded Expression is detected in the neural tube in a dorsoventral gradient.

Specimen E 12.5: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: embryo Absent


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/28/2024
MGI 6.13
The Jackson Laboratory