Gene Expression Data
Assay Details
Assay
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Reference:
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J:4500
Meyer BI, et al., Mouse Cdx-1 expression during gastrulation. Development. 1993 Jan;117(1):191-203
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:1345962
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Gene symbol:
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Cdx1
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Gene name:
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caudal type homeobox 1
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Probe:
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Cdx-1 probe1
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Probe preparation:
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Antisense labelled with S35 RNA
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Results
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Specimen
not shown:
embryonic day 6.5
(more )
Note: Early primitive streak stage embryo.
Specimen
not shown:
(close )
Genetic Background:
|
(NMRI x C57BL/6)F1
|
Age:
|
embryonic day 6.5
|
Sex:
|
Not Specified
|
Type:
|
Not Specified
|
Note:
|
Early primitive streak stage embryo.
|
Specimen
not shown:
embryonic day 7.0
(more )
Note: Mid-primitive streak stage embryo.
Specimen
not shown:
(close )
Genetic Background:
|
(NMRI x C57BL/6)F1
|
Age:
|
embryonic day 7.0
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Sex:
|
Not Specified
|
Type:
|
Not Specified
|
Note:
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Mid-primitive streak stage embryo.
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Specimen
1A,1B:
embryonic day 7.5
(more )
Note: Late streak stage embryo.
Specimen
1A,1B:
(close )
Genetic Background:
|
(NMRI x C57BL/6)F1
|
Age:
|
embryonic day 7.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
Late streak stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: primitive streak |
Present |
|
1A/B
|
Transcripts were present in ectodermal and mesodermal cells of the primitive streak.
|
TS11: embryo mesoderm |
Weak |
Regionally restricted |
1A/B
|
Anterior to the node, expression extended into the neurectodermal and paraxial mesodermal cells with a boundary directly rostral to the notochordal cells.
|
TS11: neural ectoderm |
Weak |
Regionally restricted |
1A/B
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Anterior to the node, expression extended into the neurectodermal and paraxial mesodermal cells with a boundary directly rostral to the notochordal cells.
|
TS11: notochordal process |
Absent |
|
1A/B
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Notochordal cells showed no expression.
|
Specimen
1C,1D:
embryonic day 7.5
(more )
Note: Late streak stage embryo.
Specimen
1C,1D:
(close )
Genetic Background:
|
(NMRI x C57BL/6)F1
|
Age:
|
embryonic day 7.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
Late streak stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: primitive streak |
Present |
|
1C/D
|
Transcripts were present in ectodermal and mesodermal cells of the primitive streak.
|
TS11: embryo mesoderm |
Weak |
Regionally restricted |
1C/D
|
Anterior to the node, expression extended into the neurectodermal and paraxial mesodermal cells with a boundary directly rostral to the notochordal cells.
|
TS11: neural ectoderm |
Weak |
Regionally restricted |
1C/D
|
Anterior to the node, expression extended into the neurectodermal and paraxial mesodermal cells with a boundary directly rostral to the notochordal cells.
|
Specimen
1E,1F:
embryonic day 7.5
(more )
Note: Late streak stage embryo.
Specimen
1E,1F:
(close )
Genetic Background:
|
(NMRI x C57BL/6)F1
|
Age:
|
embryonic day 7.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
Late streak stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: primitive streak |
Present |
Regionally restricted |
1E/F
|
Expression was restricted to the ingressing zone at the anterior end but became progressively broader towards the posterior end of the embryo.
|
Specimen
1G,1H:
embryonic day 7.5
(more )
Note: Late streak stage embryo.
Specimen
1G,1H:
(close )
Genetic Background:
|
(NMRI x C57BL/6)F1
|
Age:
|
embryonic day 7.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
Late streak stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: primitive streak |
Present |
Regionally restricted |
1G/H
|
Expression was restricted to the ingressing zone at the anterior end but became progressively broader towards the posterior end of the embryo.
|
Specimen
1I,1J:
embryonic day 7.5
(more )
Note: Late streak stage embryo.
Specimen
1I,1J:
(close )
Genetic Background:
|
(NMRI x C57BL/6)F1
|
Age:
|
embryonic day 7.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
Late streak stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS11: primitive streak |
Present |
Regionally restricted |
1I/J
|
Expression was restricted to the ingressing zone at the anterior end but became progressively broader towards the posterior end of the embryo.
|
Specimen
2A,2B:
embryonic day 8.0
(more )
Note: Head process stage embryo.
Specimen
2A,2B:
(close )
Genetic Background:
|
(NMRI x C57BL/6)F1
|
Age:
|
embryonic day 8.0
|
Sex:
|
Not Specified
|
Type:
|
section
|
Note:
|
Head process stage embryo.
|
Structure |
Level |
Pattern |
Image |
Note |
TS12: primitive streak |
Present |
|
2A/B
|
|
TS12: embryo |
Present |
Regionally restricted |
2A/B
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Expression extended laterally to the primitive streak. Expression anterior to the node decreased strongly.
|
Specimen
2C,2D:
embryonic day 8.5
(more )
Specimen
2C,2D:
(close )
Genetic Background:
|
(NMRI x C57BL/6)F1
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: embryo |
Present |
Regionally restricted |
2C/D
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Expression could be found in the whole posterior part of the embryo.
|
TS13: future hindbrain |
Present |
Regionally restricted |
2C/D
|
Expression was detected in the neurectoderm at the posterior hindbrain level.
|
Specimen
2E,2F:
embryonic day 8.5
(more )
Specimen
2E,2F:
(close )
Genetic Background:
|
(NMRI x C57BL/6)F1
|
Age:
|
embryonic day 8.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
Structure |
Level |
Pattern |
Image |
Note |
TS13: future hindbrain |
Present |
Regionally restricted |
2E/F
|
Expression was detected in the neurectoderm at the posterior hindbrain level.
|
TS13: primitive streak |
Present |
|
2E/F
|
|
TS13: embryo mesenchyme |
Weak |
Regionally restricted |
2E/F
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The mesoderm exhibited a slightly weaker expression compared to the ectodermal cells in the primitive streak reagion. The signal was reduced further in mesodermal cells located anterior to the node, than in ectodermal cells of the developing neural tube.
|
TS13: neural tube |
Present |
Regionally restricted |
2E/F
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Expression was detected in ectodermal cells of the developing neural tube.
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TS13: somite |
Present |
|
2E/F
|
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Specimen
2G,2H:
embryonic day 9.5
(more )
Specimen
2G,2H:
(close )
Genetic Background:
|
(NMRI x C57BL/6)F1
|
Age:
|
embryonic day 9.5
|
Sex:
|
Not Specified
|
Type:
|
section
|
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