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Gene Expression Data
Assay Details
Assay
Reference: J:10731 Gaunt SJ, et al., Mouse Hox-3.4: homeobox sequence and embryonic expression patterns compared with other members of the Hox gene network. Development. 1990 Jun;109(2):329-39
Assay type: RNA in situ
MGI Accession ID: MGI:1341328
Gene symbol: Hoxa5
Gene name: homeobox A5
Probe: Hoxa5 probe2
Probe preparation: Antisense labelled with S35 RNA
Visualized with: Autoradiography
Results
Specimen 4D: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord Present Graded 4D There is an anterior-to-posterior fall in abundance at the anterior end of the spinal cord. The fall in expression is at prevertebra 1 in dorsal parts and prevertebra 7 in ventral parts of the cord.
TS20: esophagus Absent 4D
TS20: trachea Strong 4D

Specimen 5C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord mantle layer Present Regionally restricted 5C Expression is low in central,lateral and dorsal parts but is high in ventral parts.

Specimen 6C: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: C3 vertebral cartilage condensation Present Graded 6C Expression increased from prevertebrae 3-7.
TS20: C4 vertebral cartilage condensation Present Graded 6C Expression increased from prevertebrae 3-7.
TS20: C5 vertebral cartilage condensation Present Graded 6C Expression increased from prevertebrae 3-7.
TS20: C6 vertebral cartilage condensation Present Graded 6C Expression increased from prevertebrae 3-7.
TS20: C7 vertebral cartilage condensation Strong 6C
TS20: T1 vertebral cartilage condensation Strong 6C
TS20: T2 vertebral cartilage condensation Strong 6C
TS20: T3 vertebral cartilage condensation Strong 6C
TS20: T4 vertebral cartilage condensation Strong 6C
TS20: T5 vertebral cartilage condensation Strong 6C
TS20: T6 vertebral cartilage condensation Strong 6C
TS20: T7 vertebral cartilage condensation Strong 6C
TS20: L1 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: L2 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: L3 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: L4 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: L5 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: L6 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: S1 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: S2 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: S3 vertebral pre-cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: S4 vertebral pre-cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: T10 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: T11 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: T12 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: T13 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: T8 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.
TS20: T9 vertebral cartilage condensation Present Graded 6C Expression declined in more posterior vertebrae.

Specimen 11F: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: spinal cord Present Graded 11F There is an anterior-to-posterior fall in abundance at the anterior end of the spinal cord. The fall in expression is at prevertebra 1 in dorsal parts and prevertebra 7 in ventral parts of the cord.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/28/2024
MGI 6.13
The Jackson Laboratory