About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:49164 Ding Q, et al., Diminished Sonic hedgehog signaling and lack of floor plate differentiation in Gli2 mutant mice. Development. 1998 Jul;125(14):2533-43
Assay type: RNA in situ
MGI Accession ID: MGI:1277848
Gene symbol: Shh
Gene name: sonic hedgehog
Probe: Shh cDNA2
Probe preparation: Antisense RNA
Results
Specimen 2I: embryonic day 8.5 (more )
Note: 8-somite stage.
Structure Level Pattern Image Note
TS13: notochord Present 2I
Specimen 2J: embryonic day 8.5; Gli2tm1Alj/Gli2tm1Alj (more )
Note: 8-somite stage.
Structure Level Pattern Image Note
TS13: notochord Weak 2J
Specimen 2K: embryonic day 9.0 (more )
Note: 15-somite stage.
Structure Level Pattern Image Note
TS14: notochord Present 2K
Specimen 2L: embryonic day 9.0; Gli2tm1Alj/Gli2tm1Alj (more )
Note: 15-somite stage.
Structure Level Pattern Image Note
TS14: notochord Present 2L
TS14: neural tube floor plate Absent 2L
Specimen 2M: embryonic day 9.5 (more )
Note: 25-somite stage.
Structure Level Pattern Image Note
TS15: notochord Present 2M
Specimen 2N: embryonic day 9.5; Gli2tm1Alj/Gli2tm1Alj (more )
Note: 25-somite stage.
Structure Level Pattern Image Note
TS15: notochord Present 2N
TS15: neural tube floor plate Absent 2N
TS15: future forebrain Present Regionally restricted 2N Ventral forebrain expression could be clearly detected in the mutants.
Specimen 2O: embryonic day 9.0 (more )
Note: 15-somite stage.
Structure Level Pattern Image Note
TS14: future spinal cord Present 2O
TS14: notochord Present 2O
Specimen 2P: embryonic day 9.0; Gli2tm1Alj/Gli2tm1Alj (more )
Note: 15-somite stage.
Structure Level Pattern Image Note
TS14: notochord Present 2P
TS14: neural tube floor plate Absent 2P
Specimen not shown: embryonic day 10.5; Gli2tm1Alj/Gli2tm1Alj (more )
Structure Level Pattern Image Note
TS17: notochord Present
Specimen 3A: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: notochord Present 3A
TS20: spinal cord Present 3A
TS20: tail spinal cord Present 3A
Specimen 3B: embryonic day 12.5; Gli2tm1Alj/Gli2tm1Alj (more )
Structure Level Pattern Image Note
TS20: notochord Present 3B
TS20: spinal cord Present 3B
TS20: tail spinal cord Present 3B
TS20: spinal cord floor plate Absent 3B
Specimen not shown: embryonic day 14.5; Gli2tm1Alj/Gli2tm1Alj (more )
Structure Level Pattern Image Note
TS22: spinal cord Present
TS22: tail spinal cord Present
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/30/2025
MGI 6.24 		The Jackson Laboratory