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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Clrn1tm1.1Kuna
targeted mutation 1.1, Kumar N Alagramam
MGI:3850171
Summary 2 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
hm1
Clrn1tm1.1Kuna/Clrn1tm1.1Kuna involves: C57BL/6J MGI:3850181
cx2
Clrn1tm1.1Kuna/Clrn1tm1.1Kuna
Tg(Atoh1-Clrn1)#Kuna/0
involves: C57BL/6J MGI:6156835


Genotype
MGI:3850181
hm1
Allelic
Composition
Clrn1tm1.1Kuna/Clrn1tm1.1Kuna
Genetic
Background
involves: C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Clrn1tm1.1Kuna mutation (0 available); any Clrn1 mutation (16 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
N
• between P21 and P30, vestibular hair cell morphology is normal (J:150215)
• hair cell ribbon synapses are normal (J:186316)
• by P30, outer and inner hair cells are missing unlike in wild-type mice
• by P21, outer hair cells are lost from the cochlea unlike wild-type mice
• by P30 outer and inner hair cells are missing unlike in wild-type mice
• disrupted integrity that is more severe than in Clrn1tm2.1Kuna homozygotes
• however, tip links are normal
• disrupted at age P2, P10, P21, P36 and P100
• outer hair cell stereociliary bundles are disorganized and circular clusters of abnormal stereocilia are observed (J:150215)
• there is little progression in the severity of stereocilia defects between P2 and P15 (J:150215)
• disrupted at age P2, P10, P21, P36 and P100 (J:255408)
• in the basal turn of the cochlea by P30
• by P30, the organ of Corti collapses
• cochlear hair cells exhibit reduced FM1-43 loading compared with wild-type cells
• cochlear hair cells exhibit reduced amplitudes and sensitivity of transduction currents compared with wild-type cells
• at P18 at 2, 4 and 8 kHz
• vestibular hair cells exhibit reduced amplitudes and sensitivity of transduction currents compared with wild-type cells
• at P14 and P20, peak latencies are decreased compared to controls
• at P21, response peak latencies are prolonged compared to controls
• at P14 and P20, in brainstem auditory evoked potential thresholds are elevated compared to controls
• at P21, 30% mice exhibit an increase in brainstem auditory evoked potential threshold compared with wild-type mice
• mice exhibit progressive hearing loss (J:150215)
• at P30, hearing function is absent (J:150215)
• progressive hearing loss resulting in deafness by age P22 (J:255408)
• by P30
• at P1, linear vestibular evoked potential response peak latencies are prolonged compared to in wild-type mice
• between P21 and P30, the threshold of vestibular evoked potential is higher in some mice than in wild-type mice
• between P21 and P30, mice exhibit abnormalities in linear vestibular evoked potential response peak latencies compared with wild-type mice

behavior/neurological
• between P21 and P90, mice are less stable in the water and tend to roll from one side to the other compared with wild-type mice
• between p21 to P40, mice exhibit mild and variable head bobbing unlike wild-type mice

vision/eye
N
• mice exhibit normal photoreceptor and neuron morphology and physiology

nervous system
• by P30, outer and inner hair cells are missing unlike in wild-type mice
• by P21, outer hair cells are lost from the cochlea unlike wild-type mice
• by P30 outer and inner hair cells are missing unlike in wild-type mice
• disrupted integrity that is more severe than in Clrn1tm2.1Kuna homozygotes
• however, tip links are normal
• disrupted at age P2, P10, P21, P36 and P100
• outer hair cell stereociliary bundles are disorganized and circular clusters of abnormal stereocilia are observed (J:150215)
• there is little progression in the severity of stereocilia defects between P2 and P15 (J:150215)
• disrupted at age P2, P10, P21, P36 and P100 (J:255408)
• cochlear hair cells exhibit reduced FM1-43 loading compared with wild-type cells
• cochlear hair cells exhibit reduced amplitudes and sensitivity of transduction currents compared with wild-type cells
• at P18 at 2, 4 and 8 kHz
• vestibular hair cells exhibit reduced amplitudes and sensitivity of transduction currents compared with wild-type cells

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
Usher syndrome type 3A DOID:0110841 OMIM:276902
J:150215




Genotype
MGI:6156835
cx2
Allelic
Composition
Clrn1tm1.1Kuna/Clrn1tm1.1Kuna
Tg(Atoh1-Clrn1)#Kuna/0
Genetic
Background
involves: C57BL/6J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Clrn1tm1.1Kuna mutation (0 available); any Clrn1 mutation (16 available)
Tg(Atoh1-Clrn1)#Kuna mutation (0 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hearing/vestibular/ear
• progressive deterioration of bundle structure from age P30
• some ears with patches with only few, disrupted, bundles remaining at age P100
• grossly comparable to wild-type at age P2, P10, P21 and P36
• shortest row of stereocilia depleted more than in wild-type at age P21
• progressive deterioration of bundle structure from age P30
• some ears with patches with only few, disrupted, bundles remaining at age P100
• grossly comparable to wild-type at age P2, P10, P21 and P36
• delayed onset progressive hearing loss resulting in deafness by age P70

nervous system
• progressive deterioration of bundle structure from age P30
• some ears with patches with only few, disrupted, bundles remaining at age P100
• grossly comparable to wild-type at age P2, P10, P21 and P36
• shortest row of stereocilia depleted more than in wild-type at age P21
• progressive deterioration of bundle structure from age P30
• some ears with patches with only few, disrupted, bundles remaining at age P100
• grossly comparable to wild-type at age P2, P10, P21 and P36

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
Usher syndrome type 3 DOID:0110828 J:255408





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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory