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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Clcn7+
wild type
MGI:2438271
Summary 7 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
ht1
Clcn7tm1.1Mjec/Clcn7+ involves: 129 * 129S/SvEv * C57BL/6 MGI:5563125
ht2
Clcn7tm5.1Tjj/Clcn7+ involves: 129S1/Sv * 129X1/SvJ * C57BL/6 MGI:6267452
ht3
Clcn7tm4.1Tjj/Clcn7+ involves: 129S1/Sv * 129X1/SvJ * C57BL/6 MGI:4459534
ht4
Clcn7tm1.1Teti/Clcn7+ involves: 129S2/SvPas * C57BL/6 MGI:5563098
ht5
Clcn7tm1.1Mjec/Clcn7+ involves: 129S/SvEv * BALB/cJ * C57BL/6 MGI:5563152
ht6
Clcn7tm1.1Mjec/Clcn7+ involves: 129S/SvEv * C57BL/6 * DBA/2J MGI:5563141
ht7
Clcn7tm1.1Mawa/Clcn7+ involves: C57BL/6J * C57BL/6N * CD-1 MGI:6259526


Genotype
MGI:5563125
ht1
Allelic
Composition
Clcn7tm1.1Mjec/Clcn7+
Genetic
Background
involves: 129 * 129S/SvEv * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Clcn7tm1.1Mjec mutation (0 available); any Clcn7 mutation (42 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton
• whole areal bone mineral density at 3 months of age is very high
• Background Sensitivity: 8% increase in whole body areal bone mineral density on the 129 background compared to 4% increase on a DBA/2J background and 3.8% on a BALB/cJ background
• trabecular separation is lower

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
autosomal dominant osteopetrosis 2 DOID:0110938 OMIM:166600
J:203761




Genotype
MGI:6267452
ht2
Allelic
Composition
Clcn7tm5.1Tjj/Clcn7+
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Clcn7tm5.1Tjj mutation (0 available); any Clcn7 mutation (42 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
normal phenotype
• mice lack an obvious phenotype




Genotype
MGI:4459534
ht3
Allelic
Composition
Clcn7tm4.1Tjj/Clcn7+
Genetic
Background
involves: 129S1/Sv * 129X1/SvJ * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Clcn7tm4.1Tjj mutation (0 available); any Clcn7 mutation (42 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
nervous system
• after 5 months, mice exhibit hippocampal degeneration with features of lysosomal disease unlike wild-type mice

vision/eye




Genotype
MGI:5563098
ht4
Allelic
Composition
Clcn7tm1.1Teti/Clcn7+
Genetic
Background
involves: 129S2/SvPas * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Clcn7tm1.1Teti mutation (0 available); any Clcn7 mutation (42 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
hematopoietic system
• increase in osteoclast number at 3 months of age
• increase in osteoclast surface/bone surface ratio in the proximal tibia at 3 months of age
• when cultured with M-CSF and RANKL, TRAcP-positive mononuclear osteoclast precursors from the bone marrow form a higher number of osteoclasts
• osteoclasts show a reduction of resorption pit formation

homeostasis/metabolism

immune system
• increase in osteoclast number at 3 months of age
• increase in osteoclast surface/bone surface ratio in the proximal tibia at 3 months of age
• when cultured with M-CSF and RANKL, TRAcP-positive mononuclear osteoclast precursors from the bone marrow form a higher number of osteoclasts
• osteoclasts show a reduction of resorption pit formation

nervous system
N
• mice do not exhibit neurodegeneration in the hippocampus or cerebellar cortex at 1 or 12 months of age

skeleton
• increase in osteoclast number at 3 months of age
• increase in osteoclast surface/bone surface ratio in the proximal tibia at 3 months of age
• when cultured with M-CSF and RANKL, TRAcP-positive mononuclear osteoclast precursors from the bone marrow form a higher number of osteoclasts
• osteoclasts show a reduction of resorption pit formation
• bone marrow shows increased TRAcP-positive mononuclear osteoclast precursors; when cultured with M-CSF and RANKL, these precursors form a higher number of osteoclasts
• 3 month old mice have a higher whole body areal bone mineral density
• 3 month old mice exhibit a greater trabecular bone volume in femur, tibia, and vertebrae
• in 3 month old mice
• 3 month old mice exhibit a lesser trabecular separation
• however, no changes in trabecular thickness are seen
• increase in bone mass is persistent with time
• females have a lower bone mass and more pronounced bone volume/total tissue volume elevation than males
• exhibit signs of milder osteopetrosis
• marker analysis suggests a reduction of bone resorption

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
autosomal dominant osteopetrosis 2 DOID:0110938 OMIM:166600
J:203761




Genotype
MGI:5563152
ht5
Allelic
Composition
Clcn7tm1.1Mjec/Clcn7+
Genetic
Background
involves: 129S/SvEv * BALB/cJ * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Clcn7tm1.1Mjec mutation (0 available); any Clcn7 mutation (42 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton
• Background Sensitivity: 3.8% increase in whole body areal bone mineral density on the BALB/cJ background compared to 8% increase on a 129 background and 4% on a DBA/2J background




Genotype
MGI:5563141
ht6
Allelic
Composition
Clcn7tm1.1Mjec/Clcn7+
Genetic
Background
involves: 129S/SvEv * C57BL/6 * DBA/2J
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Clcn7tm1.1Mjec mutation (0 available); any Clcn7 mutation (42 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
homeostasis/metabolism

skeleton
• Background Sensitivity: 4% increase in whole body areal bone mineral density on the DBA/2J background compared to 8% increase on a 129 background and 3.8% on a BALB/cJ background
• trabecular separation is lower

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
autosomal dominant osteopetrosis 2 DOID:0110938 OMIM:166600
J:203761




Genotype
MGI:6259526
ht7
Allelic
Composition
Clcn7tm1.1Mawa/Clcn7+
Genetic
Background
involves: C57BL/6J * C57BL/6N * CD-1
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Clcn7tm1.1Mawa mutation (1 available); any Clcn7 mutation (42 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton
• males exhibit more osteoclasts per bone perimeter and surface area indicating increased osteoclast number
• interferon-gamma therapy decreases osteoclast number
• males show a slight increase in bone mineral density at 12 weeks of age
• mice exhibit an increase in trabecular bone volume fraction
• interferon-gamma therapy from 4-12 weeks of age does not reduce trabecular bone volume
• males exhibit a decrease in cortical area fraction
• males exhibit a decrease in cortical thickness
• females exhibit an increase in trabecular thickness
• males, but not females, show a decrease in energy to ultimate force in the three-point bending assay, indicating decreased bone strength

hematopoietic system
• males exhibit more osteoclasts per bone perimeter and surface area indicating increased osteoclast number
• interferon-gamma therapy decreases osteoclast number

immune system
• males exhibit more osteoclasts per bone perimeter and surface area indicating increased osteoclast number
• interferon-gamma therapy decreases osteoclast number

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
autosomal dominant osteopetrosis 2 DOID:0110938 OMIM:166600
J:254787





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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/24/2026
MGI 6.24
The Jackson Laboratory