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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Hoxa5tm1Rob
targeted mutation 1, Elizabeth J Robertson
MGI:2150397
Summary 7 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
hm1
Hoxa5tm1Rob/Hoxa5tm1Rob 129S(Cg)-Hoxa5tm1Rob MGI:3612385
hm2
Hoxa5tm1Rob/Hoxa5tm1Rob B6.129S(Cg)-Hoxa5tm1Rob MGI:3612387
hm3
Hoxa5tm1Rob/Hoxa5tm1Rob involves: 129S/SvEv * C57BL/6 * MF1 MGI:4941623
hm4
Hoxa5tm1Rob/Hoxa5tm1Rob involves: 129S/SvEv * MF1 MGI:3028504
cx5
Hoxa5tm1Rob/Hoxa5tm1Rob
Pdgfratm11(EGFP)Sor/Pdgfra+
involves: 129S/SvEv * 129S4/SvJaeSor * C57BL/6 * MF1 MGI:4941631
cx6
Hoxa5tm1Rob/Hoxa5+
Hoxa6tm1Mrc/Hoxa6+
Hoxb5tm1Mrc/Hoxb5+
Hoxb6tm1Mrc/Hoxb6+
Hoxc5tm1Mrc/Hoxc5+
Hoxc6tm1Dds/Hoxc6+
involves: 129S/SvEv * 129S7/SvEvBrd MGI:4358354
cx7
Hoxa5tm1Rob/Hoxa5tm1Rob
Hoxb5tm1Mrc/Hoxb5tm1Mrc
Hoxc5tm1Mrc/Hoxc5tm1Mrc
involves: 129S/SvEv * 129S7/SvEvBrd MGI:4358348


Genotype
MGI:3612385
hm1
Allelic
Composition
Hoxa5tm1Rob/Hoxa5tm1Rob
Genetic
Background
129S(Cg)-Hoxa5tm1Rob
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa5tm1Rob mutation (1 available); any Hoxa5 mutation (27 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• a little less than half die by weaning with 85% of those deaths occuring within 24 hours of birth
• Background Sensitivity: a little less than half die by weaning
• some mice survive to adulthood and are fertile; however, survivors display limited growth and delayed eye opening

skeleton
• the cricoid is always larger than the thyroid cartilage due to fusion with the first tracheal rings
• the cricoid cartilage is fused with the first tracheal rings
• tracheal rings do not display a normal banding pattern
• the cartilage does not not extend as dorsally as in wild-type

respiratory system
• disorganized larynx morphology
• the cricoid is always larger than the thyroid cartilage due to fusion with the first tracheal rings
• reduced branching of the bronchial tree associated with disorganization of the surrounding mesenchyme
• at E15.5, the number of bronchioli per area scored is reduced by 33%
• thickened alveolar walls at the saccular stage (E17.5-E18.5)
• cellular disorganization in the bronchial epithelial lining and underlying lamina propria
• at E15.5, the number of terminal acini per area scored is reduced by 33%
• the diameter of terminal acini is generally reduced in size
• high proportion of collapsed lungs at autopsy
• at birth, fluid-filled bronchioli and alveoli are observed
• at E15.5, the diameter of bronchioli is generally reduced in size
• cellular disorganization in the bronchiolar epithelial lining and underlying lamina propria
• disorganized tracheal epithelium and adjacent submucosa and thickened lamina propria, with variable expressivity
• tracheal epithelium appears to be stratified rather than pseudostratified
• wider lamina propria along the entire length of trachea
• tracheal rings do not display a normal banding pattern
• the cartilage does not not extend as dorsally as in wild-type
• the cricoid cartilage is fused with the first tracheal rings
• tracheal occlusion in severely affected mice
• narrowing of the trachea with severe reduction in the lumen diameter
• most pups display respiratory disterss immediately after birth
• reduced levels of pulmonary surfactant proteins

digestive/alimentary system
• delayed maturation of the secretion pattern of digestive enzymes for disaccharides
• air in stomach and intestines at death

vision/eye
• in mice surviving to adulthood (J:45341)
• by about 7 days (J:84449)

hearing/vestibular/ear
• delayed ear elevation by approximately 1.5 days

growth/size/body
• delayed ear elevation by approximately 1.5 days
• air in stomach and intestines at death
• at 10 months of age, 5 of 8 ovaries from nulliparous female homozygotes contain large fluid-filled epithelial cysts; in contrast, only two small cysts are detected in 1of 5 control ovaries
• immunolabeling studies suggest that these ovarian epithelial inclusion cysts originate from the ovarian surface epithelium, a source of epithelial ovarian carcinomas
• staining by ovarian cancer markers supports the notion that these cysts may represent preneoplastic lesions
• at 10 months of age, estrous acyclicity and presence of ovarian epithelial cysts correlate with a reduced expression of specific EGFR signaling components
• however, 4- and 10-month-old nulliparous females exhibit normal ovarian folliculogenesis at diestrus
• similarly, ovarian histology of pregnant female homozygotes is normal
• in mice surviving to adulthood (J:45341)
• between 13 and 35 days after birth (J:84449)
• size differential decreases after 5 weeks of age and is only 2% by age 84 days (J:84449)

endocrine/exocrine glands
• thyroid follicles slightly disorganized at E16.5
• large proportion of empty or incompletely filled follicles at E17.5-E18.5
• thyroid normal at birth through 30 days of age but follicle diameter decreased 15% at 30 days of age
• at 10 months of age, 5 of 8 ovaries from nulliparous female homozygotes contain large fluid-filled epithelial cysts; in contrast, only two small cysts are detected in 1of 5 control ovaries
• immunolabeling studies suggest that these ovarian epithelial inclusion cysts originate from the ovarian surface epithelium, a source of epithelial ovarian carcinomas
• staining by ovarian cancer markers supports the notion that these cysts may represent preneoplastic lesions
• at 10 months of age, estrous acyclicity and presence of ovarian epithelial cysts correlate with a reduced expression of specific EGFR signaling components
• however, 4- and 10-month-old nulliparous females exhibit normal ovarian folliculogenesis at diestrus
• similarly, ovarian histology of pregnant female homozygotes is normal

homeostasis/metabolism
• at 10 months of age, nulliparous females exhibit a 2-fold increase in serum 17beta-estradiol concentrations at estrus relative to wild-type controls
• elevated TSH levels at 15 days of age but not at 17 days
• most dead pups display cyanotic skin

craniofacial
• delayed ear elevation by approximately 1.5 days

reproductive system
• at 10 months of age, 5 of 8 ovaries from nulliparous female homozygotes contain large fluid-filled epithelial cysts; in contrast, only two small cysts are detected in 1of 5 control ovaries
• immunolabeling studies suggest that these ovarian epithelial inclusion cysts originate from the ovarian surface epithelium, a source of epithelial ovarian carcinomas
• staining by ovarian cancer markers supports the notion that these cysts may represent preneoplastic lesions
• at 10 months of age, estrous acyclicity and presence of ovarian epithelial cysts correlate with a reduced expression of specific EGFR signaling components
• however, 4- and 10-month-old nulliparous females exhibit normal ovarian folliculogenesis at diestrus
• similarly, ovarian histology of pregnant female homozygotes is normal
• nulliparous females display precocious puberty, with the first estrus observed earlier (day 31.9) relative to wild-type controls (day 34.4)
• notably, vaginal opening occurs at similar ages for mutant and control females
• nulliparous female homozygotes display an early onset of estrous acyclicity
• starting at 4.5-6 months of age, nulliparous females show a significant decrease in the number of cycles per month with a lengthened diestrus period
• by 8-10 months of age, nulliparous females show prolonged diestrus and metestrus periods with a reduced estrus duration leading to a further decrease in the number of estruses per month
• however, at 8-10 months of age, all female homozygotes are fertile with a mean litter size that is comparable to that of wild-type controls
• starting at 4.5-6 months of age
• by 8-10 months of age
• by 8-10 months of age
• nulliparous females show a prolonged estrous cycle with increased metestrus-diestrus length that worsens with age




Genotype
MGI:3612387
hm2
Allelic
Composition
Hoxa5tm1Rob/Hoxa5tm1Rob
Genetic
Background
B6.129S(Cg)-Hoxa5tm1Rob
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa5tm1Rob mutation (1 available); any Hoxa5 mutation (27 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• 85% of mice that die, die within 24 hours of birth
• Background Sensitivity: few survivors (3%) at weaning, unlike mice on an inbred 129 background where about 16% survive to weaning

skeleton
• always larger than thyroid cartilage

respiratory system
• always larger than thyroid cartilage
• reduced branching of the bronchial tree
• high proportion of collapsed lungs at autopsy
• thickened alveolar walls and areas of poorly inflated alveoli
• disorganized tracheal epithelium and a thickened lamina propria
• tracheal occlusion frequent
• reduced levels of pulmonary surfactant proteins

vision/eye
• in mice surviving to adulthood

growth/size/body
• air in stomach and intestines at death
• in mice surviving to adulthood

digestive/alimentary system
• air in stomach and intestines at death




Genotype
MGI:4941623
hm3
Allelic
Composition
Hoxa5tm1Rob/Hoxa5tm1Rob
Genetic
Background
involves: 129S/SvEv * C57BL/6 * MF1
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa5tm1Rob mutation (1 available); any Hoxa5 mutation (27 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
respiratory system
• chronic lung inflammation, including goblet cell hyperplasia, mucus hypersecretion, and recruitment of inflammatory cells is observed
• a significantly higher number of macrophages, lymphocytes and neutrophils is detected in the bronchoalveolar lavage fluid (BALF) relative to that in wild-type controls
• mutant BALF contains large, vacuolated macrophages with dark inclusions, not seen in control samples
• most macrophages stain positively for MMP-12, suggesting increased elastase production in mutant lungs
• inflammatory response is associated with slightly elevated MMP2 and MMP9 activities in alveolar macrophage-conditioned medium
• at P5, very few growing septa are observed, indicating impaired alveolar septation
• at P15, only some alveoli are formed unlike in wild-type lungs
• at P0, P5, and P15, the lung weight/body weight ratio is lower than that in wild-type controls; however, this difference is resolved by P31
• lung proliferation is initially reduced (P0 and P5) but subsequently higher than that in wild-type lungs (P15 and P31), with no significant differences noted at P60
• no significant differences in lung apoptosis are observed at any postnatal stage tested
• at P31, some areas of mutant lungs are completely depleted of alveoli, whereas others display large tubular structures
• at P0, mutant lungs are collapsed unlike wild-type lungs
• at P15 and P31, areas of atelectasis are observed
• at P15, enlarged distal airspaces are observed
• at P5, very few growing septa are observed unlike in wild-type lungs
• at P31 and P60, an emphysema-like phenotype is observed
• at P0, mutant lungs are collapsed with a thickened parenchymal layer
• at P5 and P15, alveolar myofibroblasts are abnormally trapped in the parenchyma surrounding alveoli rather than found at the tip of the growing septa as in wild-type lungs
• abnormal positioning of alveolar myofibroblasts results in improper elastin deposition and septa formation
• a significantly higher percentage of alveolar macrophages is observed from birth to adulthood, except for P15
• at P31 and P60, an accumulation of vacuolated (hypertrophic and foamy) alveolar macrophages is observed, indicating an inflammatory response
• at P31, a small but significant increase in the number of Foxa2-positive type II pneumocytes is observed
• at P0 and P5, pulmonary elastic fibers appear tangled in the parenchyma
• at P15 onwards, elastic fibers appear more abundant, disorganized and fragmented than in wild-type lungs
• ectopic goblet cells are detected in distal structures such as the secondary bronchi and bronchioles, unlike in wild-type lungs
• specification of goblet cells is altered, resulting in hyperplasia, metaplasia, and mucus hypersecretion from P15 onwards
• a striking increase in goblet cell number is noted along the epithelium of the trachea and the primary bronchi from P15 onwards, unlike in wild-type lungs
• increased goblet cell numbers are already evident at E18.5
• reduced surfactant protein production as a result of decreased surfactant protein gene expression, not due to a change in cellularity

immune system
• a significantly higher percentage of alveolar macrophages is observed from birth to adulthood, except for P15
• at P31 and P60, an accumulation of vacuolated (hypertrophic and foamy) alveolar macrophages is observed, indicating an inflammatory response
• chronic lung inflammation, including goblet cell hyperplasia, mucus hypersecretion, and recruitment of inflammatory cells is observed
• a significantly higher number of macrophages, lymphocytes and neutrophils is detected in the bronchoalveolar lavage fluid (BALF) relative to that in wild-type controls
• mutant BALF contains large, vacuolated macrophages with dark inclusions, not seen in control samples
• most macrophages stain positively for MMP-12, suggesting increased elastase production in mutant lungs
• inflammatory response is associated with slightly elevated MMP2 and MMP9 activities in alveolar macrophage-conditioned medium

hematopoietic system
• a significantly higher percentage of alveolar macrophages is observed from birth to adulthood, except for P15
• at P31 and P60, an accumulation of vacuolated (hypertrophic and foamy) alveolar macrophages is observed, indicating an inflammatory response




Genotype
MGI:3028504
hm4
Allelic
Composition
Hoxa5tm1Rob/Hoxa5tm1Rob
Genetic
Background
involves: 129S/SvEv * MF1
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa5tm1Rob mutation (1 available); any Hoxa5 mutation (27 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
mortality/aging
• proportions of homozygotes normal at E18.5
• most deaths within 4 days after birth
• survivors lack overt phenotype and are fertile

skeleton
• extra sternebrae in 9% of homozygotes, develops from manubrium
• some cases of fusion of adjacent sternebrae
• irregularities in sternocostal attachments
• C7 rib development extensive on one or both sides
• L1 ribs in 19% of individuals
• one third of C7 ribs were fused ventrally with first thoracic rib but occasionally make independent contact with sternum
• C7 ribs in 73% of homozygotes at birth
• percent of C7 ribs lower in homozygotes surviving to adulthood
• absence of tuberulum anterior on C6 making it more similar to C3, C4, C5
• L1 ribs in 19% of individuals




Genotype
MGI:4941631
cx5
Allelic
Composition
Hoxa5tm1Rob/Hoxa5tm1Rob
Pdgfratm11(EGFP)Sor/Pdgfra+
Genetic
Background
involves: 129S/SvEv * 129S4/SvJaeSor * C57BL/6 * MF1
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa5tm1Rob mutation (1 available); any Hoxa5 mutation (27 available)
Pdgfratm11(EGFP)Sor mutation (1 available); any Pdgfra mutation (85 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
respiratory system
• at E16.5, most alveolar myofibroblast progenitors fail to spread distally and remain clustered around the epithelium, unlike in wild-type lungs where progenitors are dispersed in the lung parenchyma
• alveolar myofibroblast progenitors also fail to invade some regions of the developing lung

cellular
• wounding assays performed on primary mesenchymal cells isolated from E15.5 lungs revealed that, unlike wild-type cells which invade the wounded area within 12 hrs and fill the gap by 24 hrs, mutant cells display reduced migration at both time points
• however, no difference in migratory behavior is observed in response to gelatin in Boyden chambers




Genotype
MGI:4358354
cx6
Allelic
Composition
Hoxa5tm1Rob/Hoxa5+
Hoxa6tm1Mrc/Hoxa6+
Hoxb5tm1Mrc/Hoxb5+
Hoxb6tm1Mrc/Hoxb6+
Hoxc5tm1Mrc/Hoxc5+
Hoxc6tm1Dds/Hoxc6+
Genetic
Background
involves: 129S/SvEv * 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa5tm1Rob mutation (1 available); any Hoxa5 mutation (27 available)
Hoxa6tm1Mrc mutation (0 available); any Hoxa6 mutation (9 available)
Hoxb5tm1Mrc mutation (0 available); any Hoxb5 mutation (12 available)
Hoxb6tm1Mrc mutation (0 available); any Hoxb6 mutation (14 available)
Hoxc5tm1Mrc mutation (0 available); any Hoxc5 mutation (12 available)
Hoxc6tm1Dds mutation (0 available); any Hoxc6 mutation (11 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton
• primaxial and abaxial skeleton defects are less severe than in either triple homozygote




Genotype
MGI:4358348
cx7
Allelic
Composition
Hoxa5tm1Rob/Hoxa5tm1Rob
Hoxb5tm1Mrc/Hoxb5tm1Mrc
Hoxc5tm1Mrc/Hoxc5tm1Mrc
Genetic
Background
involves: 129S/SvEv * 129S7/SvEvBrd
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Hoxa5tm1Rob mutation (1 available); any Hoxa5 mutation (27 available)
Hoxb5tm1Mrc mutation (0 available); any Hoxb5 mutation (12 available)
Hoxc5tm1Mrc mutation (0 available); any Hoxc5 mutation (12 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton
• the clavicles are attached to the rib cage by connective tissue and do not articulate directly with it unlike in wild-type mice
• a eighth rib is attached to the sternum unlike in wild-type mice
• T1 ribs exhibit incomplete projection and T2 ribs extend but often do not reach the sternum (in 64% of mice)
• however, rib attachment posterior to T1 is normal
• ribs initiate but do not extend on T1 unlike in wild-type mice
• mice are missing a complete first rib
• rib 2 and 3 are fused prior to attachment to the sternum
• dorsal cartilage is thickened and forms a distinct curvature at the top of the vertebra unlike in wild-type mice
• C3 through T2 exhibit anterior homeotic transformations
• C3 through T1 exhibit characteristics of C2
• however, posterior thoracic, lumbar, and sacral vertebrae are normal in appearance and position
• C3 through T1 exhibit characteristics of C2
• T2 lacks anterior projections and is similar to T3
• ibs do not extend on T1 unlike in wild-type mice
• C3 through T1 exhibit characteristics of C2
• vertebral foramina extend beyond C6 to C7 unlike in wild-type mice





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last database update
04/23/2024
MGI 6.23
The Jackson Laboratory