Tnrc6a^{Gt(IST12137A2)Tigm}
Gene trapped Allele Detail

Summary

• Symbol: Tnrc6a^{Gt(IST12137A2)Tigm}
• Name: trinucleotide repeat containing 6a; gene trap IST12137A2, Texas A&M Institute for Genomic Medicine
• MGI ID: MGI:4052360
• Gene: Tnrc6a Location: Chr7:122723108-122794519 bp, + strand Genetic Position: Chr7, 67.42 cM
• Alliance: Tnrc6a^{Gt(IST12137A2)Tigm} page

Mutation origin

• Mutant Cell Line: IST12137A2
• Germline Transmission: Earliest citation of germline transmission: J:204812
• Parent Cell Line: Lex3.13 (ES Cell)
• Strain of Origin: C57BL/6N

Mutation description

• Allele Type: Gene trapped (Null/knockout, Reporter)
• Mutation: Insertion of gene trap vector Vector: VICTR76 Vector Type: gene trap
• Mutation details: Sequence tags for this gene trap insertion do not overlap a single known gene in the trapped gene orientation. It is possible that sequence tags for this gene trap overlap multiple genes in the trapped gene orientation, one or more genes in reverse orientation (not disrupted by the gene trap mechanism), or no known genes (using current gene model coordinates).
• Sequence Tags: Sequence tag details (1 tag)

  Tag ID	GenBank ID	Method	Tag Location (trapped strand)*	Select
  IST12137A2HMF1	EF887500 ; (MGI Seq Detail)	inverse PCR	Chr7:122731500-122731855 bp (-)
  * GRCm39; (strand of gene trap mutagenesis)

• Genome Context: Genome Browser view of this mutation;

  2 gene trap insertions have trapped this gene; View all gene trap sequence tags in this region

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 1 strain available Cell Lines: 1 line available
• Carrying any Tnrc6a Mutation: 92 strains or lines available

References

• Original: J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008
• All: 3 reference(s)