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Cfsw2C57BL/6J
QTL Variant Detail
Summary
QTL variant: Cfsw2C57BL/6J
Name: cystic fibrosis survival to weaning 2; C57BL/6J
MGI ID: MGI:2670723
QTL: Cfsw2  Location: Chr5:107561006-107561151 bp  Genetic Position: Chr5, cM position of peak correlated region/allele: 52.23 cM
QTL Note: genome coordinates based on the marker associated with the peak LOD score
Variant
origin
Strain of Specimen:  C57BL/6J
Variant
description
Allele Type:    QTL
Mutation:    Undefined
    This allele confers decreased survival in female animals compared to BALB/cJ.
Notes

Mapping and Phenotype information for this QTL, its variants and associated markers

J:82609

Genome scan of 156 loci was performed on a population of (B6.129P2-Cftrtm1Unc x BALB/cJ-Cftrtm1Unc)F2 animals to identify cystic fibrosis (CF) modifying QTLs. Males of parental strain BALB/cJ-Cftrtm1Unc exhibit increased post-weaning survival compared to males of parental strain B6.129P2-Cftrtm1Unc. Female animals from either strain do not exhibit this survival difference.

A locus spanning a 25 cM interval on mouse Chromosome 10, Cfid, was identified in association with post-weaning survival andintestinal distress in male animals. Cfid exhibits peak linkage at D10Mit194 (29 cM) with P=1.2 x 10-4. BALB/cJ-derived alleles confer increased lethality and intestinal blockage at Cfid whereas C57BL/6J-derived alleles confer increased survival.

Loci associated with survival to weaning were identified on mouse Chromosomes 3, 5, and X. Cfsw1 mapped to 49.7 cM on mouse Chromosome 3 and is associated with survival to weaning in female animals. Cfsw1 exhibits peak linkage at D3Mit189 (P=1.7 x 10-4) with BALB/cJ-derived alleles conferring increased survival. Cfw2 mapped to 58 cM on mouse Chromosome 5 and is associated with survival to weaning in female animals. Cfw2 exhibits peak linkage at D5Mit239 (P=8 x 10-6) with BALB/cJ-derived alleles conferring increased survival. Cfsw3 mapped to 37 cM on mouse Chromosome X and is associated with survival to weaning in male animals. Cfw3 spans from 29 cM - 45 cM and exhibits peak linkage at DXMit16 (P=3.1 x 10-10) with C57BL/6J-derived alleles conferring increased survival.

References
Original:  J:82609 Haston CK, et al., Loci of intestinal distress in cystic fibrosis knockout mice. Physiol Genomics. 2003 Jan 15;12(2):79-84
All:  1 reference(s)

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory