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Gene Expression Data
Assay Details
Assay
Reference: J:370047 Komic J, et al., Spatial and Temporal Expression Patterns of EDA2R, PCDH9, and TRAF7 in Yotari (Dab1(-/-)) Mice: Implicationsfor Understanding CAKUT Pathogenesis. Int J Mol Sci. 2025 Jul 3;26(13)
Assay type: Immunohistochemistry
MGI Accession ID: MGI:8322212
Gene symbol: Traf7
Gene name: TNF receptor-associated factor 7
Antibody: TRAF7 Polyclonal antibody (11780-1-AP)
Detection system: Secondary antibody coupled to Alexa Fluor 488
Results
Specimen 7a: embryonic day 13.5 (more )
Note: Quantified in Fig 10. Double labeled: green - Traf7; red - Aqp1 (assay MGI:8322207).
Structure Level Pattern Image Note
TS21: primitive collecting duct Strong Punctate 7a merge , 7a Traf7 Expressed on the basolateral and apical membranes.
TS21: ureteric tip Strong Punctate 7a merge , 7a Traf7 Expressed on the basolateral and apical membranes.
TS21: mesenchyme of metanephros Weak Diffuse 7a Traf7 , 7a merge A mild diffuse signal was detected in the cytoplasm.
TS21: renal vesicle Weak Diffuse 7a Traf7 , 7a merge A mild diffuse signal was detected in the cytoplasm.
TS21: early nephron Weak Diffuse 7a merge , 7a Traf7 A mild diffuse signal was detected in the cytoplasm of immature glomeruli.

Specimen 7b: embryonic day 13.5 (more )
Note: Quantified in Fig 10. Double labeled: green - Traf7; red - Aqp2 (assay MGI:8322206).
Structure Level Pattern Image Note
TS21: primitive collecting duct Strong Punctate 7b merge , 7b Traf7 Expressed on the basolateral and apical membranes.
TS21: ureteric tip Strong Punctate 7b merge , 7b Traf7 Expressed on the basolateral and apical membranes.

Specimen 7c: embryonic day 13.5; Dab1yot/Dab1yot (more )
Note: Quantified in Fig 10. Double labeled: green - Traf7; red - Aqp1 (assay MGI:8322207).
Structure Level Pattern Image Note
TS21: primitive collecting duct Strong Punctate 7c merge , 7c Traf7 The staining pattern remained similar in the membrane.
TS21: ureteric tip Strong Punctate 7c merge , 7c Traf7 The staining pattern remained similar in the membrane.
TS21: early nephron Present Diffuse 7c Traf7 , 7c merge Weaker diffuse cytoplasmic staining.
TS21: renal vesicle Present Diffuse 7c Traf7 , 7c merge Weaker diffuse cytoplasmic staining.

Specimen 7d: embryonic day 13.5; Dab1yot/Dab1yot (more )
Note: Quantified in Fig 10. Double labeled: green - Traf7; red - Aqp2 (assay MGI:8322206).
Structure Level Pattern Image Note
TS21: primitive collecting duct Present Diffuse 7d merge , 7d Traf7 Weaker diffuse cytoplasmic staining.

Specimen 8a: postnatal day 4 (more )
Note: Quantified in Fig 10. Double labeled: green - Traf7; red - Aqp2 (assay MGI:8322206).
Structure Level Pattern Image Note
TS28: glomerular tuft Weak Diffuse 8a merge , 8a Traf7 Mild diffuse cytoplasmic staining.
TS28: distal convoluted tubule Moderate Diffuse 8a merge , 8a Traf7
TS28: cortical collecting duct Strong 8a Traf7 , 8a merge A strong, granular signal was localized to the apical membranes.

Specimen 8b: postnatal day 4 (more )
Note: Quantified in Fig 10. Double labeled: green - Traf7; red - Aqp2 (assay MGI:8322206).
Structure Level Pattern Image Note
TS28: loop of Henle thick limb Moderate Diffuse 8b Traf7 , 8b merge
TS28: medullary collecting duct Weak 8b merge , 8b Traf7 mild staining
TS28: renal connecting tubule Strong 8b Traf7 , 8b merge Strong, granular staining in the apical membranes.
TS28: loop of Henle thin limb Absent 8b Traf7 , 8b merge

Specimen 8c: postnatal day 4; Dab1yot/Dab1yot (more )
Note: Quantified in Fig 10. Double labeled: green - Traf7; red - Aqp2 (assay MGI:8322206).
Structure Level Pattern Image Note
TS28: distal convoluted tubule Strong Punctate 8c Traf7 , 8c merge The staining intensity was elevated, showing randomly distributed strong punctate expression on the apical membrane.
TS28: glomerular tuft Weak 8c Traf7 , 8c merge The staining remained weak.
TS28: renal proximal convoluted tubule Absent 8c Traf7 , 8c merge Lacked detectable signals in the mutant.

Specimen 8d: postnatal day 4; Dab1yot/Dab1yot (more )
Note: Quantified in Fig 10. Double labeled: green - Traf7; red - Aqp2 (assay MGI:8322206).
Structure Level Pattern Image Note
TS28: loop of Henle thick limb Strong 8d merge , 8d Traf7
TS28: loop of Henle thin limb Absent 8d merge , 8d Traf7
TS28: medullary collecting duct Absent 8d merge , 8d Traf7

Specimen 9a: postnatal day 14 (more )
Note: Quantified in Fig 10. Double labeled: green - Traf7; red - Aqp2 (assay MGI:8322206).
Structure Level Pattern Image Note
TS28: glomerular tuft Weak Diffuse 9a Traf7 , 9a merge Similar as that of P4.
TS28: distal convoluted tubule Moderate Diffuse 9a Traf7 , 9a merge Similar as that of P4.
TS28: cortical collecting duct Strong 9a Traf7 , 9a merge Similar as that of P4.

Specimen 9b: postnatal day 14 (more )
Note: Quantified in Fig 10. Double labeled: green - Traf7; red - Aqp2 (assay MGI:8322206).
Structure Level Pattern Image Note
TS28: loop of Henle thick limb Moderate Diffuse 9b merge , 9b Traf7 Similar as that of P4.
TS28: medullary collecting duct Weak 9b merge , 9b Traf7 Similar as that of P4.
TS28: renal connecting tubule Strong 9b merge , 9b Traf7 Similar as that of P4.
TS28: loop of Henle thin limb Absent 9b Traf7 , 9b merge Similar as that of P4.

Specimen 9c: postnatal day 14; Dab1yot/Dab1yot (more )
Note: Quantified in Fig 10. Double labeled: green - Traf7; red - Aqp2 (assay MGI:8322206).
Structure Level Pattern Image Note
TS28: renal proximal convoluted tubule Strong Punctate 9c merge , 9c Traf7 Strong punctate staining was also found on the apical membrane.
TS28: distal convoluted tubule Strong Punctate 9c Traf7 , 9c merge Similar as that of P4.
TS28: glomerular tuft Weak 9c Traf7 , 9c merge Similar as that of P4.

Specimen 9d: postnatal day 14; Dab1yot/Dab1yot (more )
Note: Quantified in Fig 10. Double labeled: green - Traf7; red - Aqp2 (assay MGI:8322206).
Structure Level Pattern Image Note
TS28: loop of Henle thick limb Present 9d Traf7 , 9d merge
TS28: loop of Henle thin limb Present 9d merge , 9d Traf7 This was different from that of P4.
TS28: medullary collecting duct Absent 9d merge , 9d Traf7 Similar as that of P4.

Specimen not shown: embryonic day 15.5 (more )
Note: Quantified in Fig 10.
Structure Level Pattern Image Note
TS23: collecting duct Strong Punctate Expressed on the basolateral and apical membranes.
TS23: ureteric tip Strong Punctate Expressed on the basolateral and apical membranes.
TS23: mesenchyme of metanephros Weak Diffuse A mild diffuse signal was detected in the cytoplasm.
TS23: renal vesicle Weak Diffuse A mild diffuse signal was detected in the cytoplasm.
TS23: maturing glomerular tuft Weak Diffuse A mild diffuse signal was detected in the cytoplasm of immature glomeruli.
TS23: cortical renal tubule Present Regionally restricted Moderate to strong punctate cytoplasmic staining in the convoluted tubules.

Specimen not shown: embryonic day 15.5; Dab1yot/Dab1yot (more )
Note: Quantified in Fig 10.
Structure Level Pattern Image Note
TS23: collecting duct Strong The staining intensity was more pronounced in the mutant.
TS23: ureteric tip Strong The staining intensity was more pronounced in the mutant.
TS23: maturing glomerular tuft Present The staining intensity was more pronounced in the mutant.
TS23: mesenchyme of metanephros Present The staining intensity was more pronounced in the mutant.
TS23: renal vesicle Present The staining intensity was more pronounced in the mutant.
TS23: cortical renal tubule Present Regionally restricted The staining intensity in the convoluted tubules was more pronounced in the mutant.

Specimen S3: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: lung Present S3_merge lower , S3_Traf7


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
10/06/2026
MGI 6.29
The Jackson Laboratory