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Gene Expression Data
Assay Details
Assay
Reference: J:348278 Liakath-Ali K, et al., Cartography of teneurin and latrophilin expression reveals spatiotemporal axis heterogeneity in the mouse hippocampus during development. PLoS Biol. 2024 May;22(5):e3002599
Assay type: RNA in situ
MGI Accession ID: MGI:8259033
Gene symbol: Tenm1
Gene name: teneurin transmembrane protein 1
Probe: Mm-Tenm1 (500641)
Probe preparation: Antisense DNA
Visualized with: Fluorescence
Results
Specimen 2A: embryonic day 16.5 (more )
Note: Data from bubble plots of expression level was included in the annotation. Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Absent S2_Tenm1 2 Dapi row 2 , 2A Tenm1 2 , S2_Tenm1 2 row 2 , 2A Tenm1 , S2_Tenm1 row 2
TS24: dentate gyrus Absent S2_Tenm1 2 row 2 , 2A Tenm1 2 , S2_Tenm1 row 2 , 2A Tenm1 , S2_Tenm1 2 Dapi row 2
TS24: entorhinal cortex Absent S2_Tenm1 2 row 2 , 2A Tenm1 2 , S2_Tenm1 row 2 , 2A Tenm1 , S2_Tenm1 2 Dapi row 2
Specimen 2B: postnatal day 0 (more )
Note: Data from bubble plots of expression level was included in the annotation. Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: dentate gyrus Absent S4_Tenm1 2 Dapi row 2 , 2B Tenm1 , 2B Tenm1 2 , S4_Tenm1 row 2 , S4_Tenm1 2 row 2
TS27: entorhinal cortex Absent S4_Tenm1 2 Dapi row 2 , 2B Tenm1 , 2B Tenm1 2 , S4_Tenm1 row 2 , S4_Tenm1 2 row 2
TS27: hippocampus CA1 Absent S4_Tenm1 2 Dapi row 2 , 2B Tenm1 , 2B Tenm1 2 , S4_Tenm1 row 2 , S4_Tenm1 2 row 2
TS27: hippocampus CA2 Absent S4_Tenm1 2 Dapi row 2 , 2B Tenm1 , 2B Tenm1 2 , S4_Tenm1 row 2 , S4_Tenm1 2 row 2
TS27: hippocampus CA3 Absent S4_Tenm1 2 Dapi row 2 , 2B Tenm1 , 2B Tenm1 2 , S4_Tenm1 row 2 , S4_Tenm1 2 row 2
TS27: subiculum Absent S4_Tenm1 2 Dapi row 2 , 2B Tenm1 , 2B Tenm1 2 , S4_Tenm1 row 2 , S4_Tenm1 2 row 2
Specimen 2E: postnatal day 10 (more )
Note: Data from bubble plots of expression level was included in the annotation. Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Weak Regionally restricted 2E Tenm1 2 , S6_Tenm1 row 3 , S6_Tenm1 2 Dapi row 3 , 2E Tenm1 , S6_Tenm1 2 row 3 Weak expression was detected in the stratum oriens of the CA1 region.
TS28: CA1 pyramidal cell layer Present S6_Tenm1 2 row 3 , 2E Tenm1 2 , S6_Tenm1 2 Dapi row 3 , 2E Tenm1 , S6_Tenm1 row 3
TS28: CA2 pyramidal cell layer Present S6_Tenm1 2 Dapi row 3 , S6_Tenm1 row 3 , 2E Tenm1 , S6_Tenm1 2 row 3 , 2E Tenm1 2
TS28: CA3 pyramidal cell layer Present 2E Tenm1 , S6_Tenm1 2 Dapi row 3 , S6_Tenm1 2 row 3 , S6_Tenm1 row 3 , 2E Tenm1 2
TS28: hippocampus stratum radiatum Weak Regionally restricted 2E Tenm1 2 , S6_Tenm1 row 3 , S6_Tenm1 2 Dapi row 3 , 2E Tenm1 , S6_Tenm1 2 row 3 Weak expression was detected in the stratum radiatum of the CA2 region.
TS28: hippocampus stratum lacunosum Absent S6_Tenm1 2 Dapi row 3 , 2E Tenm1 2 , S6_Tenm1 row 3 , 2E Tenm1 , S6_Tenm1 2 row 3
TS28: dentate gyrus molecular layer Absent 2E Tenm1 , 2E Tenm1 2 , S6_Tenm1 2 row 3 , S6_Tenm1 row 3 , S6_Tenm1 2 Dapi row 3
TS28: dentate gyrus granule cell layer Strong S6_Tenm1 row 3 , S6_Tenm1 2 Dapi row 3 , 2E Tenm1 , 2E Tenm1 2 , S6_Tenm1 2 row 3
TS28: dentate gyrus polymorphic layer Present S6_Tenm1 2 row 3 , S6_Tenm1 2 Dapi row 3 , 2E Tenm1 2 , S6_Tenm1 row 3 , 2E Tenm1
TS28: subiculum Present S6_Tenm1 2 row 3 , S6_Tenm1 row 3 , S6_Tenm1 2 Dapi row 3 , 2E Tenm1 , 2E Tenm1 2 Expression was detected in the presubiculum and subiculum.
TS28: entorhinal cortex Present Non-Uniform 2E Tenm1 , S6_Tenm1 row 3 , 2E Tenm1 2 , S6_Tenm1 2 row 3 , S6_Tenm1 2 Dapi row 3 Varying expression levels were detected in layers 1-6 of the entorhinal cortex.
Specimen 2F: postnatal day 30 (more )
Note: Data from bubble plots of expression level was included in the annotation. Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampus stratum oriens Absent S8_Tenm1 2 Dapi row 1 , 2F Tenm1 2 , S8_Tenm1 row 1 , 2F Tenm1 , S8_Tenm1 2 row 1
TS28: CA1 pyramidal cell layer Present S8_Tenm1 row 1 , S8_Tenm1 2 Dapi row 1 , 2F Tenm1 , S8_Tenm1 2 row 1 , 2F Tenm1 2
TS28: CA2 pyramidal cell layer Absent 2F Tenm1 2 , S8_Tenm1 row 1 , S8_Tenm1 2 Dapi row 1 , S8_Tenm1 2 row 1 , 2F Tenm1
TS28: CA3 pyramidal cell layer Weak S8_Tenm1 2 Dapi row 1 , 2F Tenm1 , S8_Tenm1 2 row 1 , 2F Tenm1 2 , S8_Tenm1 row 1
TS28: hippocampus stratum radiatum Absent S8_Tenm1 2 Dapi row 1 , S8_Tenm1 2 row 1 , S8_Tenm1 row 1 , 2F Tenm1 , 2F Tenm1 2
TS28: hippocampus stratum lacunosum Absent S8_Tenm1 row 1 , S8_Tenm1 2 row 1 , 2F Tenm1 2 , S8_Tenm1 2 Dapi row 1 , 2F Tenm1
TS28: dentate gyrus molecular layer Absent S8_Tenm1 row 1 , S8_Tenm1 2 Dapi row 1 , 2F Tenm1 2 , 2F Tenm1 , S8_Tenm1 2 row 1
TS28: dentate gyrus granule cell layer Strong S8_Tenm1 row 1 , S8_Tenm1 2 row 1 , 2F Tenm1 , S8_Tenm1 2 Dapi row 1 , 2F Tenm1 2
TS28: dentate gyrus polymorphic layer Absent 2F Tenm1 , S8_Tenm1 2 Dapi row 1 , S8_Tenm1 row 1 , 2F Tenm1 2 , S8_Tenm1 2 row 1
TS28: subiculum Weak Regionally restricted S8_Tenm1 row 1 , S8_Tenm1 2 row 1 , 2F Tenm1 , 2F Tenm1 2 , S8_Tenm1 2 Dapi row 1 Weak expression was detected in the presubiculum.
TS28: entorhinal cortex Weak Regionally restricted 2F Tenm1 2 , S8_Tenm1 2 Dapi row 1 , S8_Tenm1 2 row 1 , 2F Tenm1 , S8_Tenm1 row 1 A drastic drop in expression at P30 was noted. Weak expression was detected in layers 1, 2, and 4-6 of the entorhinal cortex.
Specimen 3E P10: postnatal day 10 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: CA1 pyramidal cell layer Present S7_Tenm1 2 row 4 , 3E P10 left top , S7_Tenm1 row 4 , 3E P10 red dotted 1 , 3E P10 red dotted 3 , S7_Tenm1 2 Dapi row 4 Expression was increased towards the medial axis.
TS28: entorhinal cortex Present 3E P10 green dotted 1 , 3E P10 green dotted 3 , S7_Tenm1 2 row 4 , 3E P10 left top , S7_Tenm1 2 Dapi row 4 , S7_Tenm1 row 4
Specimen 3E P30: postnatal day 30 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: CA1 pyramidal cell layer Present 3E P30 left top , S9_Tenm1 2 Dapi row 4 , 3E P30 red dotted 1 , 3E P30 red dotted 3 , S9_Tenm1 2 row 4 , S9_Tenm1 row 4 Expression shifted slightly towards the lateral.
TS28: entorhinal cortex Present 3E P30 green dotted 1 , 3E P30 green dotted 3 , S9_Tenm1 2 row 4 , S9_Tenm1 row 4 , 3E P30 left top , S9_Tenm1 2 Dapi row 4
Specimen 7D: postnatal (more )
Note: Sections were post-fixed in 4% paraformaldehyde. Triple labeled: magenta - Tenm1; green - Adgrl1 (assay MGI:8259184); red - Adgrl2 (assay MGI:8259230).
Structure Cell Type Level Pattern Image Note
TS28: CA1 pyramidal cell layer hippocampal pyramidal neuron Present 7D' , 7D , 7D CA1 bottom Tenms and Lphns expression largely overlapped in CA1 stratum pyramidale cells and dentate gyrus granule cells, albeit with varying levels of expression.
TS28: dentate gyrus granule cell layer dentate gyrus granule cell Present 7D , 7D'' , 7D DG bottom Tenms and Lphns expression largely overlapped in CA1 stratum pyramidale cells and dentate gyrus granule cells, albeit with varying levels of expression.
Specimen S2 row 1: embryonic day 16.5 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Absent S2_Tenm1 2 row 1 , S2_Tenm1 2 Dapi row 1 , S2_Tenm1 row 1
Specimen S2 row 3: embryonic day 16.5 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Absent S2_Tenm1 2 Dapi row 3 , S2_Tenm1 2 row 3 , S2_Tenm1 row 3
Specimen S2 row 4: embryonic day 16.5 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Absent S2_Tenm1 row 4 , S2_Tenm1 2 row 4 , S2_Tenm1 2 Dapi row 4
Specimen S3 row 1: embryonic day 16.5 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Absent S3_Tenm1 row 1 , S3_Tenm1 2 Dapi row 1 , S3_Tenm1 2 row 1
Specimen S3 row 2: embryonic day 16.5 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Absent S3_Tenm1 row 2 , S3_Tenm1 2 row 2 , S3_Tenm1 2 Dapi row 2
Specimen S3 row 3: embryonic day 16.5 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Absent S3_Tenm1 2 row 3 , S3_Tenm1 row 3 , S3_Tenm1 2 Dapi row 3
Specimen S3 row 4: embryonic day 16.5 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS24: hippocampal formation Absent S3_Tenm1 2 row 4 , S3_Tenm1 2 Dapi row 4 , S3_Tenm1 row 4
Specimen S4 row 1: postnatal day 0 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S4_Tenm1 row 1 , S4_Tenm1 2 Dapi row 1 , S4_Tenm1 2 row 1
Specimen S4 row 3: postnatal day 0 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S4_Tenm1 2 Dapi row 3 , S4_Tenm1 2 row 3 , S4_Tenm1 row 3
Specimen S4 row 4: postnatal day 0 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S4_Tenm1 2 Dapi row 4 , S4_Tenm1 row 4 , S4_Tenm1 2 row 4
Specimen S5 row 1: postnatal day 0 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S5_Tenm1 2 Dapi row 1 , S5_Tenm1 row 1 , S5_Tenm1 2 row 1
Specimen S5 row 2: postnatal day 0 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S5_Tenm1 2 Dapi row 2 , S5_Tenm1 2 row 2 , S5_Tenm1 row 2
Specimen S5 row 3: postnatal day 0 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S5_Tenm1 2 Dapi row 3 , S5_Tenm1 2 row 3 , S5_Tenm1 row 3
Specimen S5 row 4: postnatal day 0 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS27: hippocampal formation Present S5_Tenm1 2 row 4 , S5_Tenm1 2 Dapi row 4 , S5_Tenm1 row 4
Specimen S6 row 1: postnatal day 10 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S6_Tenm1 row 1 , S6_Tenm1 2 row 1 , S6_Tenm1 2 Dapi row 1
Specimen S6 row 2: postnatal day 10 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S6_Tenm1 2 Dapi row 2 , S6_Tenm1 2 row 2 , S6_Tenm1 row 2
Specimen S6 row 4: postnatal day 10 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S6_Tenm1 row 4 , S6_Tenm1 2 row 4 , S6_Tenm1 2 Dapi row 4
Specimen S7 row 1: postnatal day 10 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S7_Tenm1 2 Dapi row 1 , S7_Tenm1 2 row 1 , S7_Tenm1 row 1
Specimen S7 row 2: postnatal day 10 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S7_Tenm1 2 row 2 , S7_Tenm1 2 Dapi row 2 , S7_Tenm1 row 2
Specimen S7 row 3: postnatal day 10 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S7_Tenm1 row 3 , S7_Tenm1 2 row 3 , S7_Tenm1 2 Dapi row 3
Specimen S8 row 2: postnatal day 30 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S8_Tenm1 2 Dapi row 2 , S8_Tenm1 2 row 2 , S8_Tenm1 row 2
Specimen S8 row 3: postnatal day 30 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S8_Tenm1 row 3 , S8_Tenm1 2 row 3 , S8_Tenm1 2 Dapi row 3
Specimen S8 row 4: postnatal day 30 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S8_Tenm1 row 4 , S8_Tenm1 2 Dapi row 4 , S8_Tenm1 2 row 4
Specimen S9 row 1: postnatal day 30 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S9_Tenm1 2 Dapi row 1 , S9_Tenm1 2 row 1 , S9_Tenm1 row 1
Specimen S9 row 2: postnatal day 30 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S9_Tenm1 2 row 2 , S9_Tenm1 row 2 , S9_Tenm1 2 Dapi row 2
Specimen S9 row 3: postnatal day 30 (more )
Note: Double labeled: green - Tenm1; red - Tenm2 (assay MGI:8259038). Sections were post-fixed in 4% paraformaldehyde.
Structure Level Pattern Image Note
TS28: hippocampal formation Present S9_Tenm1 2 Dapi row 3 , S9_Tenm1 row 3 , S9_Tenm1 2 row 3
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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10/06/2026
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