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Gene Expression Data
Assay Details
Assay
Reference: J:317829 Wang F, et al., Single-cell architecture and functional requirement of alternative splicing during hematopoietic stem cell formation. Sci Adv. 2022 Jan 7;8(1):eabg5369
Assay type: Immunohistochemistry
MGI Accession ID: MGI:8207915
Gene symbol: Runx1
Gene name: runt related transcription factor 1
Antibody: anti-Runx1
Results
Specimen 4B Runx1 (Sec31a): embryonic day 11.0 (more )
Note: 36-40 somite pairs. Triple labeled: yellow - Runx1; green - Sec31a (assay MGI:8207885); red - Sec31a (assay MGI:8207891).
Structure Level Pattern Image Note
TS17: aorta-gonad-mesonephros Present Regionally restricted 4B Merge (Sec31a) , 4B Runx1 (Sec31a) Expression in intra-aortic hematopoietic clusters.
Specimen 4B Runx1 (Tmpo): embryonic day 11.0 (more )
Note: 36-40 somite pairs. Triple labeled: yellow - Runx1; green - Tmpo (assay MGI:8207886); red - Tmpo (assay MGI:8207892).
Structure Level Pattern Image Note
TS17: aorta-gonad-mesonephros Present Regionally restricted 4B Merge (Tmpo) , 4B Runx1 (Tmpo) Expression in intra-aortic hematopoietic clusters.
Specimen 4B Runx1 (Ntmt1): embryonic day 11.0 (more )
Note: 36-40 somite pairs. Triple labeled: yellow - Runx1; green - Ntmt1 (assay MGI:8207887); red - Ntmt1 (assay MGI:8207893).
Structure Level Pattern Image Note
TS17: aorta-gonad-mesonephros Present Regionally restricted 4B Runx1 (Ntmt1) , 4B Merge (Ntmt1) Expression in intra-aortic hematopoietic clusters.
Specimen 4B Runx1 (Pisd): embryonic day 11.0 (more )
Note: 36-40 somite pairs. Triple labeled: yellow - Runx1; green - Pisd (assay MGI:8207888); red - Pisd (assay MGI:8207895).
Structure Level Pattern Image Note
TS17: aorta-gonad-mesonephros Present Regionally restricted 4B Runx1 (Pisd) , 4B Merge (Pisd) Expression in intra-aortic hematopoietic clusters.
Specimen 4B Runx1 (Clk1): embryonic day 11.0 (more )
Note: 36-40 somite pairs. Triple labeled: yellow - Runx1; green - Clk1 (assay MGI:8207889); red - Clk1 (assay MGI:8207896).
Structure Level Pattern Image Note
TS17: aorta-gonad-mesonephros Present Regionally restricted 4B Merge (Clk1) , 4B Runx1 (Clk1) Expression in intra-aortic hematopoietic clusters.
Specimen S4B Runx1 (Zfpl1): embryonic day 11.0 (more )
Note: 36-40 somite pairs. Triple labeled: yellow - Runx1; green - Zfpl1 (assay MGI:8207899); red - Zfpl1 (assay MGI:8207908).
Structure Level Pattern Image Note
TS17: aorta-gonad-mesonephros Present Regionally restricted S4B Merge (Zfpl1) , S4B Runx1 (Zfpl1) Expression in intra-aortic hematopoietic clusters.
Specimen S4B Runx1 (Mpdu1): embryonic day 11.0 (more )
Note: 36-400 somite pairs. Triple labeled: yellow - Runx1; green - Mpdu1 (assay MGI:8207900); red - Mpdu1 (assay MGI:8207909).
Structure Level Pattern Image Note
TS17: aorta-gonad-mesonephros Present Regionally restricted S4B Merge (Mpdu1) , S4B Runx1 (Mpdu1) Expression in intra-aortic hematopoietic clusters.
Specimen S4B Runx1 (Coro1a): embryonic day 11.0 (more )
Note: 36-40 somite pairs. Triple labeled: yellow - Runx1; green - Coro1a (assay MGI:8207901); red - Coro1a (assay MGI:8207911).
Structure Level Pattern Image Note
TS17: aorta-gonad-mesonephros Present Regionally restricted S4B Runx1 (Coro1a) , S4B Merge (Coro1a) Expression in intra-aortic hematopoietic clusters.
Specimen S4B Runx1 (Nfkb1): embryonic day 11.0 (more )
Note: 36-40 somite pairs. Triple labeled: yellow - Runx1; green - Nfkb1 (assay MGI:8207902); red - Nfkb1 (assay MGI:8207912).
Structure Level Pattern Image Note
TS17: aorta-gonad-mesonephros Present Regionally restricted S4B Merge (Nfkb1) , S4B Runx1 (Nfkb1) Expression in intra-aortic hematopoietic clusters.
Specimen S4B Runx1 (Ttll4): embryonic day 11.0 (more )
Note: 36-40 somite pairs. Triple labeled: yellow - Runx1; green - Ttl4 (assay MGI:8207905); red - Ttl4 (assay MGI:8207913).
Structure Level Pattern Image Note
TS17: aorta-gonad-mesonephros Present Regionally restricted S4B Runx1 (Ttll4) , S4B Merge (Ttll4) Expression in intra-aortic hematopoietic clusters.
Specimen S4B Runx1 (E130309D02Rik): embryonic day 11.0 (more )
Note: 36-40 somite pairs. Triple labeled: yellow - Runx1; green - Ints15 (assay MGI:8207907); red - Ints15 (assay MGI:8207914).
Structure Level Pattern Image Note
TS17: aorta-gonad-mesonephros Present Regionally restricted S4B Merge (E130309D02Rik) , S4B Runx1 (E130309D02Rik) Expression in intra-aortic hematopoietic clusters.
Specimen S6C Srsf2f/+ or Srsf2f/f: embryonic day 10.0; Srsf2tm1Xdfu/? (more )
Note: 31-35 somite pairs. Triple labeled: green - Runx1; magenta - Acta2 (assay MGI:8207917); blue - Pecam1 (assay MGI:8207916).
Structure Level Pattern Image Note
TS16: aorta-gonad-mesonephros Present Regionally restricted S6C f/+ or f/f Expression in large and small intra-aortic hematopoietic clusters.
Specimen S6C VEC-Cre;Srsf2f/f: embryonic day 10.0; Srsf2tm1Xdfu/Srsf2tm1Xdfu, Tg(Cdh5-cre)7Mlia/0 (more )
Note: Conditional mutant. 31-35 somite pairs. Triple labeled: green - Runx1; magenta - Acta2 (assay MGI:8207917); blue - Pecam1 (assay MGI:8207916).
Structure Level Pattern Image Note
TS16: aorta-gonad-mesonephros Present Regionally restricted S6C Vec-Cre; f/f Expression in large and small intra-aortic hematopoietic clusters.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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10/06/2026
MGI 6.29 		The Jackson Laboratory