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Gene Expression Data
Assay Details
Assay
Reference: J:321499 Lee DR, et al., Transcriptional heterogeneity of ventricular zone cells in the ganglionic eminences of the mouse forebrain. Elife. 2022 Feb 17;11:e71864
Assay type: RNA in situ
MGI Accession ID: MGI:7720395
Gene symbol: Ebf1
Gene name: early B cell factor 1
Probe: Mm-Ebf1 (433411)
Probe preparation: Antisense RNA
Visualized with: Fluorescence
Results
Specimen 6D LGE/MGE: embryonic day 12.5 (more )
Note: Multi-labeled: cyan - Ebf1; green - Cxcl14 (assay MGI:7720345); red - Maf (assay MGI:7720343); magenta - Pou3f1 (assay MGI:7720342).
Structure Level Pattern Image Note
TS20: lateral ganglionic eminence Present Regionally restricted 6D left Expression was detected in the marginal zone in the ventral lateral ganglionic eminence.
Specimen 6D CGE: embryonic day 12.5 (more )
Note: Multi-labeled: cyan - Ebf1; green - Cxcl14 (assay MGI:7720345); red - Maf (assay MGI:7720343); magenta - Pou3f1 (assay MGI:7720342).
Structure Level Pattern Image Note
TS20: caudal ganglionic eminence Ambiguous 6D right
Specimen 8 S1B E12.5 MGE & LGE: embryonic day 12.5 (more )
Note: Double labeled: green - Ebf1; red - Sp8 (assay MGI:7720344).
Structure Level Pattern Image Note
TS20: lateral ganglionic eminence Present Regionally restricted 8 S1B E12.5 MGE & LGE Expression was consistent between E12.5 and E14.5 in the lateral ganglionic eminence subventricular zone/marginal zone.
Specimen 8 S1B E14.5 MGE & LGE: embryonic day 14.5 (more )
Note: Double labeled: green - Ebf1; red - Sp8 (assay MGI:7720344).
Structure Level Pattern Image Note
TS22: lateral ganglionic eminence Present Regionally restricted 8 S1B E14.5 MGE & LGE Expression was consistent between E12.5 and E14.5 in the lateral ganglionic eminence subventricular zone/marginal zone.
Specimen 8 S1B E12.5 CGE: embryonic day 12.5 (more )
Note: Double labeled: green - Ebf1; red - Sp8 (assay MGI:7720344).
Structure Level Pattern Image Note
TS20: caudal ganglionic eminence Ambiguous 8 S1B E12.5 CGE
Specimen 8 S1B E14.5 CGE: embryonic day 14.5 (more )
Note: Double labeled: green - Ebf1; red - Sp8 (assay MGI:7720344).
Structure Level Pattern Image Note
TS22: caudal ganglionic eminence Ambiguous 8 S1B E14.5 CGE
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory