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Gene Expression Data
Assay Details
Assay
Reference: J:282029 Ino H, Immunohistochemical characterization of the orphan nuclear receptor ROR alpha in the mouse nervous system. J Histochem Cytochem. 2004 Mar;52(3):311-23
Assay type: Immunohistochemistry
MGI Accession ID: MGI:7293320
Gene symbol: Rora
Gene name: RAR-related orphan receptor alpha
Antibody: anti-RORalpha (C-16) (sc-6062)
Detection system: Secondary antibody coupled to Alexa Fluor 488
Results
Specimen 4A/C: postnatal adult (more )
Note: Double labeled: green - Rora; red - Calb1 (assay MGI:7293322).
Structure Cell Type Level Pattern Image Note
TS28: cerebellum Purkinje cell layer Purkinje cell Present 4A , 4C

Specimen 4D/F: postnatal adult (more )
Note: Double labeled: green - Rora; red - Pvalb (assay MGI:7293323).
Structure Cell Type Level Pattern Image Note
TS28: cerebellum molecular layer cerebellar stellate cell Present 4D , 4F
TS28: cerebellum molecular layer cerebellum basket cell Present 4D , 4F
TS28: cerebellum granule cell layer Absent 4F , 4D

Specimen 4G/I: postnatal adult (more )
Note: Double labeled: green - Rora; red - Calb1 (assay MGI:7293322).
Structure Cell Type Level Pattern Image Note
TS28: dorsal cochlear nucleus Purkinje cell Present Regionally restricted 4I , 4G Expression in ectopic Purkinje cells.

Specimen 4J/L: postnatal adult (more )
Note: Double labeled: green - Rora; red - Pvalb (assay MGI:7293323).
Structure Cell Type Level Pattern Image Note
TS28: dorsal cochlear nucleus cerebellar stellate cell Present 4L , 4J Expression many cells - stellate cells and cells which may be cartwheel cells.

Specimen 5A/C: postnatal adult (more )
Note: Double labeled: green - Rora; red - Rbfox3 (assay MGI:7293324).
Structure Level Pattern Image Note
TS28: ventral posterior lateral thalamic nucleus Present Regionally restricted 5C , 5A Expression in some but not all NeuN (Rbfox3)-expressing neurons.
TS28: reticular thalamic nucleus Absent 5A , 5C

Specimen 5D/F: postnatal adult (more )
Note: Double labeled: green - Rora; red - Pvalb (assay MGI:7293323).
Structure Level Pattern Image Note
TS28: reticular thalamic nucleus Absent 5F , 5D

Specimen 7A/C: postnatal day 7 (more )
Note: Double labeled: green - Rora; red - Pvalb (assay MGI:7293323).
Structure Cell Type Level Pattern Image Note
TS28: cerebellum Purkinje cell Present 7A , 7C
TS28: cerebellum molecular layer Present 7C , 7A

Specimen 7D/F: postnatal day 14 (more )
Note: Double labeled: green - Rora; red - Pvalb (assay MGI:7293323).
Structure Cell Type Level Pattern Image Note
TS28: cerebellum molecular layer cerebellar stellate cell Present Regionally restricted 7F , 7D Expression in stellate cells and basket cells in deep and superficial layers of molecular layer.
TS28: cerebellum molecular layer cerebellum basket cell Present Regionally restricted 7F , 7D Expression in stellate cells and basket cells in deep and superficial layers of molecular layer.

Specimen 7G/I: postnatal day 21 (more )
Note: Double labeled: green - Rora; red - Pvalb (assay MGI:7293323).
Structure Cell Type Level Pattern Image Note
TS28: cerebellum molecular layer cerebellar stellate cell Present Regionally restricted 7I , 7G Expression in stellate cells and basket cells in deep and superficial layers of molecular layer.
TS28: cerebellum molecular layer cerebellum basket cell Present Regionally restricted 7I , 7G Expression in stellate cells and basket cells in deep and superficial layers of molecular layer.


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory