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Gene Expression Data
Assay Details
Assay
Reference: J:321365 Knoedler JR, et al., A functional cellular framework for sex and estrous cycle-dependent gene expression and behavior. Cell. 2022 Feb 17;185(4):654-671.e22
Assay type: RNA in situ
MGI Accession ID: MGI:6886052
Gene symbol: Cckar
Gene name: cholecystokinin A receptor
Probe: Cckar probe1
Probe preparation: Antisense labelled with Alexa Fluor
Visualized with: Fluorescence
Results
Specimen S1F: postnatal adult (more )
Note: coronal section
Structure Cell Type Level Pattern Image Note
TS28: medial amygdaloid nucleus neuron Present S1F Cckar Some expression is seen in the medial amygdala (MeA).
Specimen 3C: postnatal adult (more )
Note: Double labeled, sexually receptive female: green - Cckar; red - Esr1 (assay MGI:6886064)
Structure Cell Type Level Pattern Image Note
TS28: medial amygdaloid nucleus neuron Present 3C Cckar - DEG , 3C Cckar - Merge Sparse expression is seen in the medial amygdala (MeA); 4.6% of Esr1 positive neurons cells express it.
Specimen 7C: postnatal adult (more )
Note: Double labeled: red - Cckar; green - Esr1 (assay MGI:6886064)
Structure Cell Type Level Pattern Image Note
TS28: ventromedial hypothalamic nucleus neuron Present Regionally restricted 7C Merge , 7C Cckar Expression is restricted to the ventrolateral component of the Esr1 positive cells in the ventromedial hypothalamus ventrolateralis (VMHvl).
Specimen S7D: postnatal adult; Cckarem1(icre)Shah/Cckar+ (more )
Note: Double labeled: green - Cckar RNA; red - Cckar reporter (assay MGI:6885930)
Structure Cell Type Level Pattern Image Note
TS28: ventromedial hypothalamic nucleus neuron Present Regionally restricted S7D Cckar , S7D Merge Expression is seen in the ventromedial hypothalamus ventrolateralis (VMHvl).
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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07/29/2025
MGI 6.24 		The Jackson Laboratory